RNA–Protein interactions for RNA: ENST00000289228.6

ACTR1B-201, Transcript of ARP1 actin related protein 1 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR1B, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1B-201ENST00000289228 FSIP2Q5CZC0 6907 aa7.39□□□□□ -1.23
ACTR1B-201ENST00000289228 LCE2DQ5TA82 110 aaPredicted RBP7.38□□□□□ -1.23
ACTR1B-201ENST00000289228 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
ACTR1B-201ENST00000289228 MT1GP13640 62 aa7.31□□□□□ -1.24
ACTR1B-201ENST00000289228 KRTAP19-3Q7Z4W3 81 aa7.31□□□□□ -1.24
ACTR1B-201ENST00000289228 MT1MQ8N339 61 aa7.31□□□□□ -1.24
ACTR1B-201ENST00000289228 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
ACTR1B-201ENST00000289228 MUC12Q9UKN1 5478 aa7.22□□□□□ -1.25
ACTR1B-201ENST00000289228 CRCT1Q9UGL9 99 aa7.15□□□□□ -1.27
ACTR1B-201ENST00000289228 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
ACTR1B-201ENST00000289228 SPRR2FQ96RM1 72 aa7.03□□□□□ -1.28
ACTR1B-201ENST00000289228 DSTQ03001 7570 aaKnown RBP6.87□□□□□ -1.31
ACTR1B-201ENST00000289228 KRTAP12-4P60329 112 aa6.84□□□□□ -1.31
ACTR1B-201ENST00000289228 LCE3BQ5TA77 95 aa6.77□□□□□ -1.33
ACTR1B-201ENST00000289228 MACF1Q9UPN3 7388 aaKnown RBP6.76□□□□□ -1.33
ACTR1B-201ENST00000289228 KRTAP6-1Q3LI64 71 aa6.64□□□□□ -1.35
ACTR1B-201ENST00000289228 KRTAP4-9Q9BYQ8 210 aa6.61□□□□□ -1.35
ACTR1B-201ENST00000289228 MT1AP04731 61 aa6.6□□□□□ -1.35
ACTR1B-201ENST00000289228 LCE1AQ5T7P2 110 aa6.54□□□□□ -1.36
ACTR1B-201ENST00000289228 SYNE2Q8WXH0 6885 aaKnown RBP6.52□□□□□ -1.37
ACTR1B-201ENST00000289228 MDN1Q9NU22 5596 aa6.51□□□□□ -1.37
ACTR1B-201ENST00000289228 KRTAP5-9P26371 169 aa6.48□□□□□ -1.37
ACTR1B-201ENST00000289228 SYNE1Q8NF91 8797 aaKnown RBP6.46□□□□□ -1.38
ACTR1B-201ENST00000289228 KRTAP5-5Q701N2 237 aaPredicted RBP6.45□□□□□ -1.38
ACTR1B-201ENST00000289228 LCE3DQ9BYE3 92 aa6.41□□□□□ -1.38
ACTR1B-201ENST00000289228 SPRR2EP22531 72 aa6.38□□□□□ -1.39
ACTR1B-201ENST00000289228 SPRR2BP35325 72 aa6.38□□□□□ -1.39
ACTR1B-201ENST00000289228 SPRR2AP35326 72 aa6.38□□□□□ -1.39
ACTR1B-201ENST00000289228 KRTAP9-2Q9BYQ4 174 aa6.38□□□□□ -1.39
ACTR1B-201ENST00000289228 LCE3EQ5T5B0 92 aa6.33□□□□□ -1.4
ACTR1B-201ENST00000289228 KRTAP9-4Q9BYQ2 154 aa6.2□□□□□ -1.42
ACTR1B-201ENST00000289228 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
ACTR1B-201ENST00000289228 SPRR2DP22532 72 aa6.1□□□□□ -1.43
ACTR1B-201ENST00000289228 PRM1P04553 51 aa6.06□□□□□ -1.44
ACTR1B-201ENST00000289228 KRTAP6-2Q3LI66 62 aa5.95□□□□□ -1.46
ACTR1B-201ENST00000289228 MT3P25713 68 aa5.92□□□□□ -1.46
ACTR1B-201ENST00000289228 KRTAP6-3Q3LI67 103 aa5.9□□□□□ -1.47
ACTR1B-201ENST00000289228 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
ACTR1B-201ENST00000289228 OBSCNQ5VST9 7968 aa5.65□□□□□ -1.5
ACTR1B-201ENST00000289228 KRTAP5-4Q6L8H1 288 aa5.64□□□□□ -1.51
ACTR1B-201ENST00000289228 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
ACTR1B-201ENST00000289228 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
ACTR1B-201ENST00000289228 NEBP20929 6669 aa5.41□□□□□ -1.54
ACTR1B-201ENST00000289228 MT4P47944 62 aa5.37□□□□□ -1.55
ACTR1B-201ENST00000289228 KRTAP2-2Q9BYT5 123 aa5.32□□□□□ -1.56
ACTR1B-201ENST00000289228 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
ACTR1B-201ENST00000289228 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
ACTR1B-201ENST00000289228 KRTAP5-2Q701N4 177 aa5.29□□□□□ -1.56
ACTR1B-201ENST00000289228 HMCN1Q96RW7 5635 aa5.05□□□□□ -1.6
ACTR1B-201ENST00000289228 KRTAP5-3Q6L8H2 238 aa5.04□□□□□ -1.6
ACTR1B-201ENST00000289228 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
ACTR1B-201ENST00000289228 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
ACTR1B-201ENST00000289228 MUC5ACP98088 5654 aa4.96□□□□□ -1.61
ACTR1B-201ENST00000289228 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
ACTR1B-201ENST00000289228 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
ACTR1B-201ENST00000289228 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
ACTR1B-201ENST00000289228 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
ACTR1B-201ENST00000289228 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
ACTR1B-201ENST00000289228 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
ACTR1B-201ENST00000289228 LCE1CQ5T751 118 aa4.55□□□□□ -1.68
ACTR1B-201ENST00000289228 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
ACTR1B-201ENST00000289228 KRTAP21-2Q3LI59 83 aa4.28□□□□□ -1.72
ACTR1B-201ENST00000289228 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
ACTR1B-201ENST00000289228 KRTAP5-7Q6L8G8 165 aa4.13□□□□□ -1.75
ACTR1B-201ENST00000289228 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
ACTR1B-201ENST00000289228 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.78
ACTR1B-201ENST00000289228 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.78
ACTR1B-201ENST00000289228 KRTAP21-1Q3LI58 79 aa3.83□□□□□ -1.8
ACTR1B-201ENST00000289228 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
ACTR1B-201ENST00000289228 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
ACTR1B-201ENST00000289228 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
ACTR1B-201ENST00000289228 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
ACTR1B-201ENST00000289228 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
ACTR1B-201ENST00000289228 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
ACTR1B-201ENST00000289228 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
ACTR1B-201ENST00000289228 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
ACTR1B-201ENST00000289228 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 15 ms