RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
BRAF-201ENST00000288602 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
BRAF-201ENST00000288602 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
BRAF-201ENST00000288602 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
BRAF-201ENST00000288602 SPRR2FQ96RM1 72 aa6.46□□□□□ -1.38
BRAF-201ENST00000288602 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
BRAF-201ENST00000288602 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
BRAF-201ENST00000288602 MT1MQ8N339 61 aa6.41□□□□□ -1.38
BRAF-201ENST00000288602 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.38
BRAF-201ENST00000288602 MT1GP13640 62 aa6.39□□□□□ -1.39
BRAF-201ENST00000288602 DSTQ03001 7570 aaKnown RBP6.38□□□□□ -1.39
BRAF-201ENST00000288602 CRCT1Q9UGL9 99 aa6.33□□□□□ -1.4
BRAF-201ENST00000288602 LCE5AQ5TCM9 118 aa6.29□□□□□ -1.4
BRAF-201ENST00000288602 KRTAP2-3P0C7H8 128 aa6.25□□□□□ -1.41
BRAF-201ENST00000288602 KRTAP2-4Q9BYR9 128 aa6.25□□□□□ -1.41
BRAF-201ENST00000288602 KRTAP2-1Q9BYU5 128 aa6.25□□□□□ -1.41
BRAF-201ENST00000288602 MDN1Q9NU22 5596 aa6.24□□□□□ -1.41
BRAF-201ENST00000288602 KRTAP5-9P26371 169 aa6.08□□□□□ -1.44
BRAF-201ENST00000288602 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
BRAF-201ENST00000288602 SPRR2EP22531 72 aa5.97□□□□□ -1.45
BRAF-201ENST00000288602 SPRR2BP35325 72 aa5.97□□□□□ -1.45
BRAF-201ENST00000288602 SPRR2AP35326 72 aa5.97□□□□□ -1.45
BRAF-201ENST00000288602 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.47
BRAF-201ENST00000288602 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.47
BRAF-201ENST00000288602 LCE3BQ5TA77 95 aa5.77□□□□□ -1.48
BRAF-201ENST00000288602 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
BRAF-201ENST00000288602 KRTAP6-1Q3LI64 71 aa5.77□□□□□ -1.49
BRAF-201ENST00000288602 KRTAP6-3Q3LI67 103 aa5.73□□□□□ -1.49
BRAF-201ENST00000288602 SPRR2DP22532 72 aa5.72□□□□□ -1.49
BRAF-201ENST00000288602 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
BRAF-201ENST00000288602 MT1AP04731 61 aa5.68□□□□□ -1.5
BRAF-201ENST00000288602 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
BRAF-201ENST00000288602 KRTAP12-4P60329 112 aa5.52□□□□□ -1.53
BRAF-201ENST00000288602 NEBP20929 6669 aa5.39□□□□□ -1.55
BRAF-201ENST00000288602 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
BRAF-201ENST00000288602 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
BRAF-201ENST00000288602 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
BRAF-201ENST00000288602 KRTAP6-2Q3LI66 62 aa5.24□□□□□ -1.57
BRAF-201ENST00000288602 KRTAP20-1Q3LI63 56 aa5.19□□□□□ -1.58
BRAF-201ENST00000288602 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
BRAF-201ENST00000288602 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
BRAF-201ENST00000288602 MT3P25713 68 aa5.12□□□□□ -1.59
BRAF-201ENST00000288602 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
BRAF-201ENST00000288602 MT4P47944 62 aa5.08□□□□□ -1.6
BRAF-201ENST00000288602 PRM1P04553 51 aa4.95□□□□□ -1.62
BRAF-201ENST00000288602 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
BRAF-201ENST00000288602 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
BRAF-201ENST00000288602 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
BRAF-201ENST00000288602 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
BRAF-201ENST00000288602 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
BRAF-201ENST00000288602 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
BRAF-201ENST00000288602 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
BRAF-201ENST00000288602 GPR98Q8WXG9 6306 aa4.51□□□□□ -1.69
BRAF-201ENST00000288602 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
BRAF-201ENST00000288602 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
BRAF-201ENST00000288602 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
BRAF-201ENST00000288602 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
BRAF-201ENST00000288602 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
BRAF-201ENST00000288602 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
BRAF-201ENST00000288602 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
BRAF-201ENST00000288602 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
BRAF-201ENST00000288602 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
BRAF-201ENST00000288602 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
BRAF-201ENST00000288602 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
BRAF-201ENST00000288602 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
BRAF-201ENST00000288602 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
BRAF-201ENST00000288602 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
BRAF-201ENST00000288602 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
BRAF-201ENST00000288602 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
BRAF-201ENST00000288602 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
BRAF-201ENST00000288602 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
BRAF-201ENST00000288602 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
BRAF-201ENST00000288602 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
BRAF-201ENST00000288602 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
BRAF-201ENST00000288602 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
BRAF-201ENST00000288602 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
BRAF-201ENST00000288602 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 68 ms