RNA–Protein interactions for RNA: ENST00000283629.7

UBP1-202, Transcript of upstream binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBP1, Length 4,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-202ENST00000283629 MT1LQ93083 61 aa6.19□□□□□ -1.42
UBP1-202ENST00000283629 MT1EP04732 61 aa6.18□□□□□ -1.42
UBP1-202ENST00000283629 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
UBP1-202ENST00000283629 SSPOA2VEC9 5147 aa6.13□□□□□ -1.43
UBP1-202ENST00000283629 KRTAP9-6A8MVA2 160 aa6.13□□□□□ -1.43
UBP1-202ENST00000283629 MUC12Q9UKN1 5478 aa6.13□□□□□ -1.43
UBP1-202ENST00000283629 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
UBP1-202ENST00000283629 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
UBP1-202ENST00000283629 KRTAP19-6Q3LI70 58 aa6□□□□□ -1.45
UBP1-202ENST00000283629 KRTAP2-3P0C7H8 128 aa5.99□□□□□ -1.45
UBP1-202ENST00000283629 KRTAP2-4Q9BYR9 128 aa5.99□□□□□ -1.45
UBP1-202ENST00000283629 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
UBP1-202ENST00000283629 LCE3DQ9BYE3 92 aa5.97□□□□□ -1.45
UBP1-202ENST00000283629 SYNE2Q8WXH0 6885 aaKnown RBP5.97□□□□□ -1.45
UBP1-202ENST00000283629 KRTAP19-3Q7Z4W3 81 aa5.93□□□□□ -1.46
UBP1-202ENST00000283629 LCE3EQ5T5B0 92 aa5.89□□□□□ -1.47
UBP1-202ENST00000283629 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
UBP1-202ENST00000283629 MT1MQ8N339 61 aa5.86□□□□□ -1.47
UBP1-202ENST00000283629 PRM1P04553 51 aa5.85□□□□□ -1.47
UBP1-202ENST00000283629 MACF1Q9UPN3 7388 aaKnown RBP5.79□□□□□ -1.48
UBP1-202ENST00000283629 SPRR2EP22531 72 aa5.76□□□□□ -1.49
UBP1-202ENST00000283629 SPRR2BP35325 72 aa5.76□□□□□ -1.49
UBP1-202ENST00000283629 SPRR2AP35326 72 aa5.76□□□□□ -1.49
UBP1-202ENST00000283629 LCE2DQ5TA82 110 aaPredicted RBP5.73□□□□□ -1.49
UBP1-202ENST00000283629 KRTAP9-2Q9BYQ4 174 aa5.65□□□□□ -1.5
UBP1-202ENST00000283629 SPRR2DP22532 72 aa5.49□□□□□ -1.53
UBP1-202ENST00000283629 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
UBP1-202ENST00000283629 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
UBP1-202ENST00000283629 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
UBP1-202ENST00000283629 KRTAP6-1Q3LI64 71 aa5.34□□□□□ -1.55
UBP1-202ENST00000283629 LCE1AQ5T7P2 110 aa5.28□□□□□ -1.56
UBP1-202ENST00000283629 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
UBP1-202ENST00000283629 MT1AP04731 61 aa5.21□□□□□ -1.58
UBP1-202ENST00000283629 MUC19Q7Z5P9 8384 aa5.13□□□□□ -1.59
UBP1-202ENST00000283629 MT3P25713 68 aa5.12□□□□□ -1.59
UBP1-202ENST00000283629 MT4P47944 62 aa5.08□□□□□ -1.6
UBP1-202ENST00000283629 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
UBP1-202ENST00000283629 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
UBP1-202ENST00000283629 KRTAP5-9P26371 169 aa4.87□□□□□ -1.63
UBP1-202ENST00000283629 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
UBP1-202ENST00000283629 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
UBP1-202ENST00000283629 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
UBP1-202ENST00000283629 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.64
UBP1-202ENST00000283629 KRTAP2-2Q9BYT5 123 aa4.84□□□□□ -1.64
UBP1-202ENST00000283629 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
UBP1-202ENST00000283629 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.67
UBP1-202ENST00000283629 LCE1EQ5T753 118 aa4.59□□□□□ -1.68
UBP1-202ENST00000283629 NEBP20929 6669 aa4.52□□□□□ -1.69
UBP1-202ENST00000283629 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
UBP1-202ENST00000283629 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
UBP1-202ENST00000283629 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
UBP1-202ENST00000283629 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
UBP1-202ENST00000283629 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
UBP1-202ENST00000283629 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
UBP1-202ENST00000283629 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
UBP1-202ENST00000283629 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
UBP1-202ENST00000283629 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
UBP1-202ENST00000283629 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
UBP1-202ENST00000283629 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
UBP1-202ENST00000283629 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
UBP1-202ENST00000283629 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
UBP1-202ENST00000283629 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
UBP1-202ENST00000283629 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
UBP1-202ENST00000283629 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
UBP1-202ENST00000283629 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
UBP1-202ENST00000283629 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
UBP1-202ENST00000283629 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.88
UBP1-202ENST00000283629 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
UBP1-202ENST00000283629 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
UBP1-202ENST00000283629 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
UBP1-202ENST00000283629 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
UBP1-202ENST00000283629 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
UBP1-202ENST00000283629 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
UBP1-202ENST00000283629 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
UBP1-202ENST00000283629 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
UBP1-202ENST00000283629 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
UBP1-202ENST00000283629 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms