RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
TNFSF4-201ENST00000281834 MACF1Q9UPN3 7388 aaKnown RBP2.15□□□□□ -2.07
TNFSF4-201ENST00000281834 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.14□□□□□ -2.07
TNFSF4-201ENST00000281834 KRTAP19-6Q3LI70 58 aa2.14□□□□□ -2.07
TNFSF4-201ENST00000281834 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
TNFSF4-201ENST00000281834 CRCT1Q9UGL9 99 aa2.12□□□□□ -2.07
TNFSF4-201ENST00000281834 SYNE2Q8WXH0 6885 aaKnown RBP2.12□□□□□ -2.07
TNFSF4-201ENST00000281834 MT1EP04732 61 aa2.12□□□□□ -2.07
TNFSF4-201ENST00000281834 KRTAP9-6A8MVA2 160 aa2.11□□□□□ -2.07
TNFSF4-201ENST00000281834 MT1LQ93083 61 aa2.1□□□□□ -2.07
TNFSF4-201ENST00000281834 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
TNFSF4-201ENST00000281834 KRTAP5-3Q6L8H2 238 aa2.08□□□□□ -2.08
TNFSF4-201ENST00000281834 SPRR2FQ96RM1 72 aa2.08□□□□□ -2.08
TNFSF4-201ENST00000281834 INE1O15225 51 aa2.06□□□□□ -2.08
TNFSF4-201ENST00000281834 KRTAP4-12Q9BQ66 201 aa2.06□□□□□ -2.08
TNFSF4-201ENST00000281834 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
TNFSF4-201ENST00000281834 MT1GP13640 62 aa2.04□□□□□ -2.08
TNFSF4-201ENST00000281834 KRTAP9-9Q9BYP9 154 aa2.03□□□□□ -2.08
TNFSF4-201ENST00000281834 KRTAP9-4Q9BYQ2 154 aa2.03□□□□□ -2.08
TNFSF4-201ENST00000281834 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.09
TNFSF4-201ENST00000281834 KRTAP19-3Q7Z4W3 81 aa2.01□□□□□ -2.09
TNFSF4-201ENST00000281834 LCE3BQ5TA77 95 aa2□□□□□ -2.09
TNFSF4-201ENST00000281834 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
TNFSF4-201ENST00000281834 MT1MQ8N339 61 aa1.99□□□□□ -2.09
TNFSF4-201ENST00000281834 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
TNFSF4-201ENST00000281834 KRTAP4-9Q9BYQ8 210 aa1.95□□□□□ -2.1
TNFSF4-201ENST00000281834 KRTAP4-2Q9BYR5 136 aa1.95□□□□□ -2.1
TNFSF4-201ENST00000281834 LCE1DQ5T752 114 aa1.93□□□□□ -2.1
TNFSF4-201ENST00000281834 KRTAP9-7A8MTY7 169 aa1.93□□□□□ -2.1
TNFSF4-201ENST00000281834 LCE5AQ5TCM9 118 aa1.92□□□□□ -2.1
TNFSF4-201ENST00000281834 KRTAP2-3P0C7H8 128 aa1.9□□□□□ -2.1
TNFSF4-201ENST00000281834 SPRR2EP22531 72 aa1.9□□□□□ -2.1
TNFSF4-201ENST00000281834 SPRR2BP35325 72 aa1.9□□□□□ -2.1
TNFSF4-201ENST00000281834 SPRR2AP35326 72 aa1.9□□□□□ -2.1
TNFSF4-201ENST00000281834 KRTAP2-4Q9BYR9 128 aa1.9□□□□□ -2.1
TNFSF4-201ENST00000281834 KRTAP2-1Q9BYU5 128 aa1.9□□□□□ -2.1
TNFSF4-201ENST00000281834 KRTAP19-4Q3LI73 84 aa1.9□□□□□ -2.11
TNFSF4-201ENST00000281834 LCE1AQ5T7P2 110 aa1.87□□□□□ -2.11
TNFSF4-201ENST00000281834 SPRR2DP22532 72 aa1.82□□□□□ -2.12
TNFSF4-201ENST00000281834 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
TNFSF4-201ENST00000281834 KRTAP4-11Q9BYQ6 195 aa1.81□□□□□ -2.12
TNFSF4-201ENST00000281834 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
TNFSF4-201ENST00000281834 NEBP20929 6669 aa1.79□□□□□ -2.12
TNFSF4-201ENST00000281834 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
TNFSF4-201ENST00000281834 MT1AP04731 61 aa1.74□□□□□ -2.13
TNFSF4-201ENST00000281834 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
TNFSF4-201ENST00000281834 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
TNFSF4-201ENST00000281834 KRTAP5-5Q701N2 237 aaPredicted RBP1.7□□□□□ -2.14
TNFSF4-201ENST00000281834 LCE3DQ9BYE3 92 aa1.69□□□□□ -2.14
TNFSF4-201ENST00000281834 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
TNFSF4-201ENST00000281834 MT4P47944 62 aa1.67□□□□□ -2.14
TNFSF4-201ENST00000281834 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
TNFSF4-201ENST00000281834 KRTAP2-2Q9BYT5 123 aa1.67□□□□□ -2.14
TNFSF4-201ENST00000281834 KRTAP5-4Q6L8H1 288 aa1.65□□□□□ -2.15
TNFSF4-201ENST00000281834 LCE3EQ5T5B0 92 aa1.64□□□□□ -2.15
TNFSF4-201ENST00000281834 LCE4AQ5TA78 99 aa1.64□□□□□ -2.15
TNFSF4-201ENST00000281834 PRM1P04553 51 aa1.61□□□□□ -2.15
TNFSF4-201ENST00000281834 MT3P25713 68 aa1.6□□□□□ -2.15
TNFSF4-201ENST00000281834 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.16
TNFSF4-201ENST00000281834 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.17
TNFSF4-201ENST00000281834 KRTAP20-2Q3LI61 65 aa1.51□□□□□ -2.17
TNFSF4-201ENST00000281834 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
TNFSF4-201ENST00000281834 KRTAP5-2Q701N4 177 aa1.46□□□□□ -2.18
TNFSF4-201ENST00000281834 LCE1EQ5T753 118 aa1.44□□□□□ -2.18
TNFSF4-201ENST00000281834 LCE1BQ5T7P3 118 aa1.43□□□□□ -2.18
TNFSF4-201ENST00000281834 AHNAK2Q8IVF2 5795 aa1.42□□□□□ -2.18
TNFSF4-201ENST00000281834 LCE1FQ5T754 118 aa1.41□□□□□ -2.18
TNFSF4-201ENST00000281834 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
TNFSF4-201ENST00000281834 KRTAP5-8O75690 187 aa1.4□□□□□ -2.19
TNFSF4-201ENST00000281834 KRTAP5-1Q6L8H4 278 aa1.34□□□□□ -2.2
TNFSF4-201ENST00000281834 KRTAP5-11Q6L8G4 156 aa1.2□□□□□ -2.22
TNFSF4-201ENST00000281834 LCE1CQ5T751 118 aa1.2□□□□□ -2.22
TNFSF4-201ENST00000281834 KRTAP4-4Q9BYR3 166 aa1.19□□□□□ -2.22
TNFSF4-201ENST00000281834 KRTAP21-2Q3LI59 83 aa1.13□□□□□ -2.23
TNFSF4-201ENST00000281834 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
TNFSF4-201ENST00000281834 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
TNFSF4-201ENST00000281834 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 140.7 ms