RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 SPRR2AP35326 72 aa2.16□□□□□ -2.06
LIN7C-201ENST00000278193 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
LIN7C-201ENST00000278193 KRTAP19-2Q3LHN2 52 aa2.12□□□□□ -2.07
LIN7C-201ENST00000278193 SPRR2DP22532 72 aa2.1□□□□□ -2.07
LIN7C-201ENST00000278193 MT1BP07438 61 aa2.1□□□□□ -2.07
LIN7C-201ENST00000278193 KRTAP19-6Q3LI70 58 aa2.1□□□□□ -2.07
LIN7C-201ENST00000278193 LCE3BQ5TA77 95 aa2.06□□□□□ -2.08
LIN7C-201ENST00000278193 FSIP2Q5CZC0 6907 aa2.05□□□□□ -2.08
LIN7C-201ENST00000278193 LOC100996750A0A140TA64 210 aa2.05□□□□□ -2.08
LIN7C-201ENST00000278193 KRTAP4-6Q9BYQ5 205 aa2.05□□□□□ -2.08
LIN7C-201ENST00000278193 MUC17Q685J3 4493 aa2.04□□□□□ -2.08
LIN7C-201ENST00000278193 MT1XP80297 61 aa2.04□□□□□ -2.08
LIN7C-201ENST00000278193 KRTAP19-5Q3LI72 72 aa2.03□□□□□ -2.08
LIN7C-201ENST00000278193 KRTAP4-12Q9BQ66 201 aa2.02□□□□□ -2.09
LIN7C-201ENST00000278193 MT1GP13640 62 aa2□□□□□ -2.09
LIN7C-201ENST00000278193 SSPOA2VEC9 5147 aa1.98□□□□□ -2.09
LIN7C-201ENST00000278193 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.97□□□□□ -2.09
LIN7C-201ENST00000278193 KRTAP20-1Q3LI63 56 aa1.97□□□□□ -2.09
LIN7C-201ENST00000278193 FLGP20930 4061 aaPredicted RBP1.97□□□□□ -2.09
LIN7C-201ENST00000278193 USH2AO75445 5202 aa1.96□□□□□ -2.1
LIN7C-201ENST00000278193 KRTAP19-3Q7Z4W3 81 aa1.93□□□□□ -2.1
LIN7C-201ENST00000278193 PRM1P04553 51 aa1.93□□□□□ -2.1
LIN7C-201ENST00000278193 KRTAP4-8A0A0G2JLE6 195 aa1.91□□□□□ -2.1
LIN7C-201ENST00000278193 KRTAP4-8Q9BYQ9 185 aa1.91□□□□□ -2.1
LIN7C-201ENST00000278193 KRTAP2-3P0C7H8 128 aa1.91□□□□□ -2.1
LIN7C-201ENST00000278193 KRTAP2-4Q9BYR9 128 aa1.91□□□□□ -2.1
LIN7C-201ENST00000278193 KRTAP2-1Q9BYU5 128 aa1.91□□□□□ -2.1
LIN7C-201ENST00000278193 MT1EP04732 61 aa1.87□□□□□ -2.11
LIN7C-201ENST00000278193 FCGBPQ9Y6R7 5405 aaPredicted RBP1.85□□□□□ -2.11
LIN7C-201ENST00000278193 MT1LQ93083 61 aa1.83□□□□□ -2.12
LIN7C-201ENST00000278193 KRTAP9-6A8MVA2 160 aa1.82□□□□□ -2.12
LIN7C-201ENST00000278193 MT1MQ8N339 61 aa1.81□□□□□ -2.12
LIN7C-201ENST00000278193 SYNE2Q8WXH0 6885 aaKnown RBP1.81□□□□□ -2.12
LIN7C-201ENST00000278193 MT4P47944 62 aa1.79□□□□□ -2.12
LIN7C-201ENST00000278193 MACF1Q9UPN3 7388 aaKnown RBP1.78□□□□□ -2.12
LIN7C-201ENST00000278193 NEBP20929 6669 aa1.76□□□□□ -2.13
LIN7C-201ENST00000278193 KRTAP19-7Q3SYF9 63 aa1.73□□□□□ -2.13
LIN7C-201ENST00000278193 KMT2DO14686 5537 aa1.72□□□□□ -2.13
LIN7C-201ENST00000278193 KRTAP5-9P26371 169 aa1.72□□□□□ -2.13
LIN7C-201ENST00000278193 MUC12Q9UKN1 5478 aa1.69□□□□□ -2.14
LIN7C-201ENST00000278193 MT1AP04731 61 aa1.67□□□□□ -2.14
LIN7C-201ENST00000278193 KRTAP4-11Q9BYQ6 195 aa1.66□□□□□ -2.14
LIN7C-201ENST00000278193 KRTAP4-7Q9BYR0 210 aa1.66□□□□□ -2.14
LIN7C-201ENST00000278193 MDN1Q9NU22 5596 aa1.65□□□□□ -2.14
LIN7C-201ENST00000278193 KRTAP4-2Q9BYR5 136 aa1.64□□□□□ -2.15
LIN7C-201ENST00000278193 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
LIN7C-201ENST00000278193 KRTAP5-3Q6L8H2 238 aa1.63□□□□□ -2.15
LIN7C-201ENST00000278193 KRTAP4-3Q9BYR4 195 aa1.63□□□□□ -2.15
LIN7C-201ENST00000278193 KRTAP4-9Q9BYQ8 210 aa1.62□□□□□ -2.15
LIN7C-201ENST00000278193 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
LIN7C-201ENST00000278193 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
LIN7C-201ENST00000278193 LCE1CQ5T751 118 aa1.6□□□□□ -2.15
LIN7C-201ENST00000278193 LCE1BQ5T7P3 118 aa1.6□□□□□ -2.15
LIN7C-201ENST00000278193 GPR98Q8WXG9 6306 aa1.59□□□□□ -2.15
LIN7C-201ENST00000278193 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
LIN7C-201ENST00000278193 DSTQ03001 7570 aaKnown RBP1.52□□□□□ -2.17
LIN7C-201ENST00000278193 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
LIN7C-201ENST00000278193 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
LIN7C-201ENST00000278193 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
LIN7C-201ENST00000278193 OBSCNQ5VST9 7968 aa1.46□□□□□ -2.18
LIN7C-201ENST00000278193 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
LIN7C-201ENST00000278193 KRTAP20-2Q3LI61 65 aa1.45□□□□□ -2.18
LIN7C-201ENST00000278193 KRTAP5-4Q6L8H1 288 aa1.44□□□□□ -2.18
LIN7C-201ENST00000278193 AHNAK2Q8IVF2 5795 aa1.44□□□□□ -2.18
LIN7C-201ENST00000278193 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
LIN7C-201ENST00000278193 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
LIN7C-201ENST00000278193 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
LIN7C-201ENST00000278193 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
LIN7C-201ENST00000278193 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
LIN7C-201ENST00000278193 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
LIN7C-201ENST00000278193 KRTAP5-8O75690 187 aa1.16□□□□□ -2.22
LIN7C-201ENST00000278193 KRTAP5-11Q6L8G4 156 aa1.12□□□□□ -2.23
LIN7C-201ENST00000278193 KRTAP4-4Q9BYR3 166 aa1.07□□□□□ -2.24
LIN7C-201ENST00000278193 KRTAP5-1Q6L8H4 278 aa1.03□□□□□ -2.24
LIN7C-201ENST00000278193 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
LIN7C-201ENST00000278193 KRTAP21-2Q3LI59 83 aa0.82□□□□□ -2.28
LIN7C-201ENST00000278193 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 125.7 ms