RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 KRTAP2-3P0C7H8 128 aa6.82□□□□□ -1.32
RAB5A-201ENST00000273047 KRTAP2-4Q9BYR9 128 aa6.82□□□□□ -1.32
RAB5A-201ENST00000273047 KRTAP2-1Q9BYU5 128 aa6.82□□□□□ -1.32
RAB5A-201ENST00000273047 DSTQ03001 7570 aaKnown RBP6.81□□□□□ -1.32
RAB5A-201ENST00000273047 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
RAB5A-201ENST00000273047 LOC100996750A0A140TA64 210 aa6.76□□□□□ -1.33
RAB5A-201ENST00000273047 MT1GP13640 62 aa6.66□□□□□ -1.34
RAB5A-201ENST00000273047 KRTAP19-3Q7Z4W3 81 aa6.65□□□□□ -1.35
RAB5A-201ENST00000273047 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
RAB5A-201ENST00000273047 SYNE2Q8WXH0 6885 aaKnown RBP6.63□□□□□ -1.35
RAB5A-201ENST00000273047 MT1MQ8N339 61 aa6.62□□□□□ -1.35
RAB5A-201ENST00000273047 SPRR2FQ96RM1 72 aa6.61□□□□□ -1.35
RAB5A-201ENST00000273047 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
RAB5A-201ENST00000273047 MDN1Q9NU22 5596 aa6.52□□□□□ -1.37
RAB5A-201ENST00000273047 LCE5AQ5TCM9 118 aa6.45□□□□□ -1.38
RAB5A-201ENST00000273047 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
RAB5A-201ENST00000273047 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
RAB5A-201ENST00000273047 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
RAB5A-201ENST00000273047 KRTAP12-4P60329 112 aa6.14□□□□□ -1.43
RAB5A-201ENST00000273047 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
RAB5A-201ENST00000273047 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
RAB5A-201ENST00000273047 SPRR2EP22531 72 aa6.05□□□□□ -1.44
RAB5A-201ENST00000273047 SPRR2BP35325 72 aa6.05□□□□□ -1.44
RAB5A-201ENST00000273047 SPRR2AP35326 72 aa6.05□□□□□ -1.44
RAB5A-201ENST00000273047 KRTAP6-1Q3LI64 71 aa6.03□□□□□ -1.44
RAB5A-201ENST00000273047 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
RAB5A-201ENST00000273047 MT1AP04731 61 aa5.85□□□□□ -1.47
RAB5A-201ENST00000273047 KRTAP5-5Q701N2 237 aaPredicted RBP5.85□□□□□ -1.47
RAB5A-201ENST00000273047 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.78□□□□□ -1.48
RAB5A-201ENST00000273047 SPRR2DP22532 72 aa5.78□□□□□ -1.48
RAB5A-201ENST00000273047 OBSCNQ5VST9 7968 aa5.78□□□□□ -1.48
RAB5A-201ENST00000273047 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
RAB5A-201ENST00000273047 KRTAP9-6A0A140TA67 174 aa5.59□□□□□ -1.51
RAB5A-201ENST00000273047 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
RAB5A-201ENST00000273047 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
RAB5A-201ENST00000273047 KRTAP9-7A8MTY7 169 aa5.52□□□□□ -1.53
RAB5A-201ENST00000273047 LCE3EQ5T5B0 92 aa5.52□□□□□ -1.53
RAB5A-201ENST00000273047 PRM1P04553 51 aa5.48□□□□□ -1.53
RAB5A-201ENST00000273047 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
RAB5A-201ENST00000273047 NEBP20929 6669 aa5.38□□□□□ -1.55
RAB5A-201ENST00000273047 MT3P25713 68 aa5.27□□□□□ -1.57
RAB5A-201ENST00000273047 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
RAB5A-201ENST00000273047 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
RAB5A-201ENST00000273047 MT4P47944 62 aa5.2□□□□□ -1.58
RAB5A-201ENST00000273047 HMCN1Q96RW7 5635 aa5.02□□□□□ -1.61
RAB5A-201ENST00000273047 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
RAB5A-201ENST00000273047 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
RAB5A-201ENST00000273047 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
RAB5A-201ENST00000273047 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
RAB5A-201ENST00000273047 KRTAP5-2Q701N4 177 aa4.83□□□□□ -1.64
RAB5A-201ENST00000273047 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
RAB5A-201ENST00000273047 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
RAB5A-201ENST00000273047 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
RAB5A-201ENST00000273047 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
RAB5A-201ENST00000273047 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
RAB5A-201ENST00000273047 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
RAB5A-201ENST00000273047 KRTAP4-2Q9BYR5 136 aa4.19□□□□□ -1.74
RAB5A-201ENST00000273047 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
RAB5A-201ENST00000273047 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
RAB5A-201ENST00000273047 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
RAB5A-201ENST00000273047 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
RAB5A-201ENST00000273047 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
RAB5A-201ENST00000273047 KRTAP21-2Q3LI59 83 aa3.87□□□□□ -1.79
RAB5A-201ENST00000273047 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
RAB5A-201ENST00000273047 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
RAB5A-201ENST00000273047 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
RAB5A-201ENST00000273047 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
RAB5A-201ENST00000273047 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
RAB5A-201ENST00000273047 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
RAB5A-201ENST00000273047 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
RAB5A-201ENST00000273047 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
RAB5A-201ENST00000273047 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
RAB5A-201ENST00000273047 KRTAP21-1Q3LI58 79 aa3.48□□□□□ -1.85
RAB5A-201ENST00000273047 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
RAB5A-201ENST00000273047 PHGR1C9JFL3 82 aa3.09□□□□□ -1.92
RAB5A-201ENST00000273047 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
RAB5A-201ENST00000273047 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 257.3 ms