RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 MT1EP04732 61 aa4.17□□□□□ -1.74
SCAF11-201ENST00000266589 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
SCAF11-201ENST00000266589 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
SCAF11-201ENST00000266589 MT1LQ93083 61 aa4.1□□□□□ -1.75
SCAF11-201ENST00000266589 LCE3BQ5TA77 95 aa4.1□□□□□ -1.75
SCAF11-201ENST00000266589 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
SCAF11-201ENST00000266589 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.76
SCAF11-201ENST00000266589 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
SCAF11-201ENST00000266589 SPRR2FQ96RM1 72 aa4.06□□□□□ -1.76
SCAF11-201ENST00000266589 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
SCAF11-201ENST00000266589 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
SCAF11-201ENST00000266589 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
SCAF11-201ENST00000266589 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
SCAF11-201ENST00000266589 MT1GP13640 62 aa3.96□□□□□ -1.78
SCAF11-201ENST00000266589 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
SCAF11-201ENST00000266589 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
SCAF11-201ENST00000266589 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
SCAF11-201ENST00000266589 INE1O15225 51 aa3.94□□□□□ -1.78
SCAF11-201ENST00000266589 MT1MQ8N339 61 aa3.93□□□□□ -1.78
SCAF11-201ENST00000266589 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
SCAF11-201ENST00000266589 NEBP20929 6669 aa3.91□□□□□ -1.78
SCAF11-201ENST00000266589 KRTAP9-6A8MVA2 160 aa3.9□□□□□ -1.79
SCAF11-201ENST00000266589 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
SCAF11-201ENST00000266589 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
SCAF11-201ENST00000266589 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
SCAF11-201ENST00000266589 LCE1DQ5T752 114 aa3.85□□□□□ -1.79
SCAF11-201ENST00000266589 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
SCAF11-201ENST00000266589 SPRR2EP22531 72 aa3.83□□□□□ -1.8
SCAF11-201ENST00000266589 SPRR2BP35325 72 aa3.83□□□□□ -1.8
SCAF11-201ENST00000266589 SPRR2AP35326 72 aa3.83□□□□□ -1.8
SCAF11-201ENST00000266589 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
SCAF11-201ENST00000266589 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
SCAF11-201ENST00000266589 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
SCAF11-201ENST00000266589 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
SCAF11-201ENST00000266589 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
SCAF11-201ENST00000266589 SPRR2DP22532 72 aa3.68□□□□□ -1.82
SCAF11-201ENST00000266589 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
SCAF11-201ENST00000266589 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
SCAF11-201ENST00000266589 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
SCAF11-201ENST00000266589 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
SCAF11-201ENST00000266589 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
SCAF11-201ENST00000266589 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
SCAF11-201ENST00000266589 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
SCAF11-201ENST00000266589 MT1AP04731 61 aa3.48□□□□□ -1.85
SCAF11-201ENST00000266589 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
SCAF11-201ENST00000266589 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
SCAF11-201ENST00000266589 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
SCAF11-201ENST00000266589 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
SCAF11-201ENST00000266589 MT4P47944 62 aa3.21□□□□□ -1.89
SCAF11-201ENST00000266589 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
SCAF11-201ENST00000266589 MT3P25713 68 aa3.15□□□□□ -1.91
SCAF11-201ENST00000266589 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
SCAF11-201ENST00000266589 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
SCAF11-201ENST00000266589 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
SCAF11-201ENST00000266589 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
SCAF11-201ENST00000266589 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
SCAF11-201ENST00000266589 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
SCAF11-201ENST00000266589 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
SCAF11-201ENST00000266589 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
SCAF11-201ENST00000266589 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
SCAF11-201ENST00000266589 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.95
SCAF11-201ENST00000266589 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.96
SCAF11-201ENST00000266589 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
SCAF11-201ENST00000266589 PRM1P04553 51 aa2.68□□□□□ -1.98
SCAF11-201ENST00000266589 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
SCAF11-201ENST00000266589 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
SCAF11-201ENST00000266589 KRTAP5-8O75690 187 aa2.58□□□□□ -2
SCAF11-201ENST00000266589 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
SCAF11-201ENST00000266589 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
SCAF11-201ENST00000266589 LCE1CQ5T751 118 aa2.53□□□□□ -2.01
SCAF11-201ENST00000266589 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
SCAF11-201ENST00000266589 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
SCAF11-201ENST00000266589 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
SCAF11-201ENST00000266589 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
SCAF11-201ENST00000266589 PHGR1C9JFL3 82 aa1.9□□□□□ -2.1
SCAF11-201ENST00000266589 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
SCAF11-201ENST00000266589 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
SCAF11-201ENST00000266589 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 147.7 ms