RNA–Protein interactions for RNA: ENST00000265849.11

PMS2-201, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS2, Length 2,855 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-201ENST00000265849 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
PMS2-201ENST00000265849 MT1GP13640 62 aa3.78□□□□□ -1.8
PMS2-201ENST00000265849 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
PMS2-201ENST00000265849 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
PMS2-201ENST00000265849 MT1MQ8N339 61 aa3.68□□□□□ -1.82
PMS2-201ENST00000265849 CRCT1Q9UGL9 99 aa3.67□□□□□ -1.82
PMS2-201ENST00000265849 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
PMS2-201ENST00000265849 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
PMS2-201ENST00000265849 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
PMS2-201ENST00000265849 KRTAP4-9Q9BYQ8 210 aa3.59□□□□□ -1.83
PMS2-201ENST00000265849 LCE3BQ5TA77 95 aa3.58□□□□□ -1.84
PMS2-201ENST00000265849 KRTAP9-2Q9BYQ4 174 aa3.58□□□□□ -1.84
PMS2-201ENST00000265849 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
PMS2-201ENST00000265849 FCGBPQ9Y6R7 5405 aaPredicted RBP3.58□□□□□ -1.84
PMS2-201ENST00000265849 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
PMS2-201ENST00000265849 MT1AP04731 61 aa3.55□□□□□ -1.84
PMS2-201ENST00000265849 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
PMS2-201ENST00000265849 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
PMS2-201ENST00000265849 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
PMS2-201ENST00000265849 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
PMS2-201ENST00000265849 PRM1P04553 51 aa3.49□□□□□ -1.85
PMS2-201ENST00000265849 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
PMS2-201ENST00000265849 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.85
PMS2-201ENST00000265849 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
PMS2-201ENST00000265849 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
PMS2-201ENST00000265849 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
PMS2-201ENST00000265849 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
PMS2-201ENST00000265849 FSIP2Q5CZC0 6907 aa3.33□□□□□ -1.88
PMS2-201ENST00000265849 LCE1DQ5T752 114 aa3.33□□□□□ -1.88
PMS2-201ENST00000265849 SPRR2FQ96RM1 72 aa3.29□□□□□ -1.88
PMS2-201ENST00000265849 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
PMS2-201ENST00000265849 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
PMS2-201ENST00000265849 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
PMS2-201ENST00000265849 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
PMS2-201ENST00000265849 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
PMS2-201ENST00000265849 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
PMS2-201ENST00000265849 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
PMS2-201ENST00000265849 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
PMS2-201ENST00000265849 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
PMS2-201ENST00000265849 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
PMS2-201ENST00000265849 MT3P25713 68 aa2.97□□□□□ -1.93
PMS2-201ENST00000265849 SPRR2AP35326 72 aa2.97□□□□□ -1.93
PMS2-201ENST00000265849 SPRR2EP22531 72 aa2.92□□□□□ -1.94
PMS2-201ENST00000265849 KRTAP5-9P26371 169 aa2.9□□□□□ -1.94
PMS2-201ENST00000265849 SPRR2BP35325 72 aa2.87□□□□□ -1.95
PMS2-201ENST00000265849 SPRR2DP22532 72 aa2.74□□□□□ -1.97
PMS2-201ENST00000265849 KRTAP20-1Q3LI63 56 aa2.68□□□□□ -1.98
PMS2-201ENST00000265849 NEBP20929 6669 aa2.67□□□□□ -1.98
PMS2-201ENST00000265849 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
PMS2-201ENST00000265849 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
PMS2-201ENST00000265849 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
PMS2-201ENST00000265849 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -1.99
PMS2-201ENST00000265849 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
PMS2-201ENST00000265849 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
PMS2-201ENST00000265849 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
PMS2-201ENST00000265849 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2
PMS2-201ENST00000265849 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
PMS2-201ENST00000265849 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
PMS2-201ENST00000265849 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
PMS2-201ENST00000265849 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
PMS2-201ENST00000265849 MT4P47944 62 aa2.43□□□□□ -2.02
PMS2-201ENST00000265849 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
PMS2-201ENST00000265849 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
PMS2-201ENST00000265849 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
PMS2-201ENST00000265849 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
PMS2-201ENST00000265849 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
PMS2-201ENST00000265849 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
PMS2-201ENST00000265849 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
PMS2-201ENST00000265849 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
PMS2-201ENST00000265849 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.08
PMS2-201ENST00000265849 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
PMS2-201ENST00000265849 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
PMS2-201ENST00000265849 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
PMS2-201ENST00000265849 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
PMS2-201ENST00000265849 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
PMS2-201ENST00000265849 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
PMS2-201ENST00000265849 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 58.7 ms