RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
PDLIM2-201ENST00000265810 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
PDLIM2-201ENST00000265810 SPRR2DP22532 72 aa4.92□□□□□ -1.62
PDLIM2-201ENST00000265810 KRTAP9-6A0A140TA67 174 aa4.9□□□□□ -1.62
PDLIM2-201ENST00000265810 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
PDLIM2-201ENST00000265810 MT1MQ8N339 61 aa4.79□□□□□ -1.64
PDLIM2-201ENST00000265810 SSPOA2VEC9 5147 aa4.77□□□□□ -1.65
PDLIM2-201ENST00000265810 KMT2DO14686 5537 aa4.76□□□□□ -1.65
PDLIM2-201ENST00000265810 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
PDLIM2-201ENST00000265810 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
PDLIM2-201ENST00000265810 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
PDLIM2-201ENST00000265810 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
PDLIM2-201ENST00000265810 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
PDLIM2-201ENST00000265810 LOC100996750A0A140TA64 210 aa4.64□□□□□ -1.67
PDLIM2-201ENST00000265810 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.64□□□□□ -1.67
PDLIM2-201ENST00000265810 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
PDLIM2-201ENST00000265810 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
PDLIM2-201ENST00000265810 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
PDLIM2-201ENST00000265810 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
PDLIM2-201ENST00000265810 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
PDLIM2-201ENST00000265810 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
PDLIM2-201ENST00000265810 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
PDLIM2-201ENST00000265810 MUC12Q9UKN1 5478 aa4.49□□□□□ -1.69
PDLIM2-201ENST00000265810 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
PDLIM2-201ENST00000265810 MT4P47944 62 aa4.38□□□□□ -1.71
PDLIM2-201ENST00000265810 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
PDLIM2-201ENST00000265810 MT1AP04731 61 aa4.3□□□□□ -1.72
PDLIM2-201ENST00000265810 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
PDLIM2-201ENST00000265810 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
PDLIM2-201ENST00000265810 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
PDLIM2-201ENST00000265810 MT3P25713 68 aa4.23□□□□□ -1.73
PDLIM2-201ENST00000265810 KRTAP2-3P0C7H8 128 aa4.22□□□□□ -1.73
PDLIM2-201ENST00000265810 KRTAP2-4Q9BYR9 128 aa4.22□□□□□ -1.73
PDLIM2-201ENST00000265810 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
PDLIM2-201ENST00000265810 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
PDLIM2-201ENST00000265810 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
PDLIM2-201ENST00000265810 MDN1Q9NU22 5596 aa4.15□□□□□ -1.75
PDLIM2-201ENST00000265810 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
PDLIM2-201ENST00000265810 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
PDLIM2-201ENST00000265810 NEBP20929 6669 aa4.07□□□□□ -1.76
PDLIM2-201ENST00000265810 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
PDLIM2-201ENST00000265810 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
PDLIM2-201ENST00000265810 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
PDLIM2-201ENST00000265810 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
PDLIM2-201ENST00000265810 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
PDLIM2-201ENST00000265810 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
PDLIM2-201ENST00000265810 PRM1P04553 51 aa3.74□□□□□ -1.81
PDLIM2-201ENST00000265810 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
PDLIM2-201ENST00000265810 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
PDLIM2-201ENST00000265810 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
PDLIM2-201ENST00000265810 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
PDLIM2-201ENST00000265810 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
PDLIM2-201ENST00000265810 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
PDLIM2-201ENST00000265810 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
PDLIM2-201ENST00000265810 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
PDLIM2-201ENST00000265810 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
PDLIM2-201ENST00000265810 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
PDLIM2-201ENST00000265810 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
PDLIM2-201ENST00000265810 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
PDLIM2-201ENST00000265810 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
PDLIM2-201ENST00000265810 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
PDLIM2-201ENST00000265810 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
PDLIM2-201ENST00000265810 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
PDLIM2-201ENST00000265810 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
PDLIM2-201ENST00000265810 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
PDLIM2-201ENST00000265810 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.96
PDLIM2-201ENST00000265810 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
PDLIM2-201ENST00000265810 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
PDLIM2-201ENST00000265810 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
PDLIM2-201ENST00000265810 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
PDLIM2-201ENST00000265810 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
PDLIM2-201ENST00000265810 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
PDLIM2-201ENST00000265810 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
PDLIM2-201ENST00000265810 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
PDLIM2-201ENST00000265810 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
PDLIM2-201ENST00000265810 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
PDLIM2-201ENST00000265810 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 128.1 ms