RNA–Protein interactions for RNA: ENST00000265663.12

NSMF-201, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NSMF, Length 2,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-201ENST00000265663 MT1EP04732 61 aa6.65□□□□□ -1.35
NSMF-201ENST00000265663 DSTQ03001 7570 aaKnown RBP6.61□□□□□ -1.35
NSMF-201ENST00000265663 KRTAP12-4P60329 112 aa6.6□□□□□ -1.35
NSMF-201ENST00000265663 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
NSMF-201ENST00000265663 CRCT1Q9UGL9 99 aa6.54□□□□□ -1.36
NSMF-201ENST00000265663 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
NSMF-201ENST00000265663 KRTAP19-6Q3LI70 58 aa6.44□□□□□ -1.38
NSMF-201ENST00000265663 MT1GP13640 62 aa6.42□□□□□ -1.38
NSMF-201ENST00000265663 MACF1Q9UPN3 7388 aaKnown RBP6.31□□□□□ -1.4
NSMF-201ENST00000265663 SYNE2Q8WXH0 6885 aaKnown RBP6.3□□□□□ -1.4
NSMF-201ENST00000265663 MT1MQ8N339 61 aa6.23□□□□□ -1.41
NSMF-201ENST00000265663 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.41
NSMF-201ENST00000265663 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
NSMF-201ENST00000265663 SPRR2FQ96RM1 72 aa6.21□□□□□ -1.42
NSMF-201ENST00000265663 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
NSMF-201ENST00000265663 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
NSMF-201ENST00000265663 KRTAP9-2Q9BYQ4 174 aa6.03□□□□□ -1.44
NSMF-201ENST00000265663 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
NSMF-201ENST00000265663 LCE3BQ5TA77 95 aa6□□□□□ -1.45
NSMF-201ENST00000265663 KRTAP9-7A8MTY7 169 aa5.95□□□□□ -1.46
NSMF-201ENST00000265663 PRM1P04553 51 aa5.95□□□□□ -1.46
NSMF-201ENST00000265663 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
NSMF-201ENST00000265663 OBSCNQ5VST9 7968 aa5.94□□□□□ -1.46
NSMF-201ENST00000265663 LCE3DQ9BYE3 92 aa5.76□□□□□ -1.49
NSMF-201ENST00000265663 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
NSMF-201ENST00000265663 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
NSMF-201ENST00000265663 KRTAP6-1Q3LI64 71 aa5.74□□□□□ -1.49
NSMF-201ENST00000265663 LCE3EQ5T5B0 92 aa5.74□□□□□ -1.49
NSMF-201ENST00000265663 KRTAP9-6A0A140TA67 174 aa5.7□□□□□ -1.5
NSMF-201ENST00000265663 MT1AP04731 61 aa5.67□□□□□ -1.5
NSMF-201ENST00000265663 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
NSMF-201ENST00000265663 SPRR2EP22531 72 aa5.6□□□□□ -1.51
NSMF-201ENST00000265663 SPRR2BP35325 72 aa5.6□□□□□ -1.51
NSMF-201ENST00000265663 SPRR2AP35326 72 aa5.6□□□□□ -1.51
NSMF-201ENST00000265663 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
NSMF-201ENST00000265663 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
NSMF-201ENST00000265663 KRTAP5-9P26371 169 aa5.4□□□□□ -1.54
NSMF-201ENST00000265663 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.55
NSMF-201ENST00000265663 SPRR2DP22532 72 aa5.33□□□□□ -1.56
NSMF-201ENST00000265663 LCE1EQ5T753 118 aa5.28□□□□□ -1.56
NSMF-201ENST00000265663 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
NSMF-201ENST00000265663 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
NSMF-201ENST00000265663 MT3P25713 68 aa4.99□□□□□ -1.61
NSMF-201ENST00000265663 NEBP20929 6669 aa4.97□□□□□ -1.61
NSMF-201ENST00000265663 MT4P47944 62 aa4.88□□□□□ -1.63
NSMF-201ENST00000265663 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
NSMF-201ENST00000265663 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
NSMF-201ENST00000265663 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
NSMF-201ENST00000265663 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
NSMF-201ENST00000265663 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
NSMF-201ENST00000265663 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
NSMF-201ENST00000265663 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
NSMF-201ENST00000265663 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
NSMF-201ENST00000265663 MUC5ACP98088 5654 aa4.34□□□□□ -1.71
NSMF-201ENST00000265663 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
NSMF-201ENST00000265663 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
NSMF-201ENST00000265663 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
NSMF-201ENST00000265663 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.74
NSMF-201ENST00000265663 MUC19Q7Z5P9 8384 aa4.14□□□□□ -1.75
NSMF-201ENST00000265663 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
NSMF-201ENST00000265663 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
NSMF-201ENST00000265663 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
NSMF-201ENST00000265663 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
NSMF-201ENST00000265663 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
NSMF-201ENST00000265663 KRTAP21-1Q3LI58 79 aa3.69□□□□□ -1.82
NSMF-201ENST00000265663 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
NSMF-201ENST00000265663 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
NSMF-201ENST00000265663 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
NSMF-201ENST00000265663 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
NSMF-201ENST00000265663 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
NSMF-201ENST00000265663 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
NSMF-201ENST00000265663 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
NSMF-201ENST00000265663 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
NSMF-201ENST00000265663 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
NSMF-201ENST00000265663 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
NSMF-201ENST00000265663 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
NSMF-201ENST00000265663 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms