RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 MT1LQ93083 61 aa3.59□□□□□ -1.84
LSG1-201ENST00000265245 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
LSG1-201ENST00000265245 FSIP2Q5CZC0 6907 aa3.58□□□□□ -1.84
LSG1-201ENST00000265245 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
LSG1-201ENST00000265245 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
LSG1-201ENST00000265245 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
LSG1-201ENST00000265245 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
LSG1-201ENST00000265245 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
LSG1-201ENST00000265245 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
LSG1-201ENST00000265245 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
LSG1-201ENST00000265245 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
LSG1-201ENST00000265245 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
LSG1-201ENST00000265245 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
LSG1-201ENST00000265245 MT1GP13640 62 aa3.39□□□□□ -1.87
LSG1-201ENST00000265245 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
LSG1-201ENST00000265245 MT1MQ8N339 61 aa3.37□□□□□ -1.87
LSG1-201ENST00000265245 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
LSG1-201ENST00000265245 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
LSG1-201ENST00000265245 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.88
LSG1-201ENST00000265245 LOC100996750A0A140TA64 210 aa3.33□□□□□ -1.88
LSG1-201ENST00000265245 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
LSG1-201ENST00000265245 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
LSG1-201ENST00000265245 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
LSG1-201ENST00000265245 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
LSG1-201ENST00000265245 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
LSG1-201ENST00000265245 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
LSG1-201ENST00000265245 LCE5AQ5TCM9 118 aa3.27□□□□□ -1.89
LSG1-201ENST00000265245 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
LSG1-201ENST00000265245 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
LSG1-201ENST00000265245 NEBP20929 6669 aa3.17□□□□□ -1.9
LSG1-201ENST00000265245 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
LSG1-201ENST00000265245 SPRR2EP22531 72 aa3.1□□□□□ -1.91
LSG1-201ENST00000265245 SPRR2BP35325 72 aa3.1□□□□□ -1.91
LSG1-201ENST00000265245 SPRR2AP35326 72 aa3.1□□□□□ -1.91
LSG1-201ENST00000265245 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
LSG1-201ENST00000265245 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
LSG1-201ENST00000265245 MT1AP04731 61 aa3.03□□□□□ -1.92
LSG1-201ENST00000265245 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
LSG1-201ENST00000265245 PRM1P04553 51 aa3.01□□□□□ -1.93
LSG1-201ENST00000265245 SPRR2DP22532 72 aa3□□□□□ -1.93
LSG1-201ENST00000265245 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
LSG1-201ENST00000265245 LCE1DQ5T752 114 aa2.92□□□□□ -1.94
LSG1-201ENST00000265245 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
LSG1-201ENST00000265245 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.94
LSG1-201ENST00000265245 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
LSG1-201ENST00000265245 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
LSG1-201ENST00000265245 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
LSG1-201ENST00000265245 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
LSG1-201ENST00000265245 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
LSG1-201ENST00000265245 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
LSG1-201ENST00000265245 MT3P25713 68 aa2.75□□□□□ -1.97
LSG1-201ENST00000265245 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
LSG1-201ENST00000265245 HMCN1Q96RW7 5635 aa2.61□□□□□ -1.99
LSG1-201ENST00000265245 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
LSG1-201ENST00000265245 KRTAP5-2Q701N4 177 aa2.59□□□□□ -2
LSG1-201ENST00000265245 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
LSG1-201ENST00000265245 MT4P47944 62 aa2.55□□□□□ -2
LSG1-201ENST00000265245 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
LSG1-201ENST00000265245 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
LSG1-201ENST00000265245 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
LSG1-201ENST00000265245 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
LSG1-201ENST00000265245 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
LSG1-201ENST00000265245 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
LSG1-201ENST00000265245 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
LSG1-201ENST00000265245 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
LSG1-201ENST00000265245 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
LSG1-201ENST00000265245 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
LSG1-201ENST00000265245 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
LSG1-201ENST00000265245 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
LSG1-201ENST00000265245 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
LSG1-201ENST00000265245 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
LSG1-201ENST00000265245 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
LSG1-201ENST00000265245 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
LSG1-201ENST00000265245 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
LSG1-201ENST00000265245 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
LSG1-201ENST00000265245 PHGR1C9JFL3 82 aa1.59□□□□□ -2.15
LSG1-201ENST00000265245 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 124.4 ms