RNA–Protein interactions for RNA: ENST00000262316.10

RHBDF1-201, Transcript of rhomboid 5 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDF1, Length 2,992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-201ENST00000262316 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
RHBDF1-201ENST00000262316 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
RHBDF1-201ENST00000262316 SYNE2Q8WXH0 6885 aaKnown RBP5.85□□□□□ -1.47
RHBDF1-201ENST00000262316 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
RHBDF1-201ENST00000262316 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
RHBDF1-201ENST00000262316 SPRR2FQ96RM1 72 aa5.77□□□□□ -1.49
RHBDF1-201ENST00000262316 MT1GP13640 62 aa5.75□□□□□ -1.49
RHBDF1-201ENST00000262316 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
RHBDF1-201ENST00000262316 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
RHBDF1-201ENST00000262316 MDN1Q9NU22 5596 aa5.65□□□□□ -1.5
RHBDF1-201ENST00000262316 MT1MQ8N339 61 aa5.64□□□□□ -1.51
RHBDF1-201ENST00000262316 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
RHBDF1-201ENST00000262316 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
RHBDF1-201ENST00000262316 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
RHBDF1-201ENST00000262316 KRTAP2-1Q9BYU5 128 aa5.49□□□□□ -1.53
RHBDF1-201ENST00000262316 LCE5AQ5TCM9 118 aa5.46□□□□□ -1.53
RHBDF1-201ENST00000262316 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
RHBDF1-201ENST00000262316 OBSCNQ5VST9 7968 aa5.36□□□□□ -1.55
RHBDF1-201ENST00000262316 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
RHBDF1-201ENST00000262316 SPRR2EP22531 72 aa5.28□□□□□ -1.56
RHBDF1-201ENST00000262316 SPRR2BP35325 72 aa5.28□□□□□ -1.56
RHBDF1-201ENST00000262316 SPRR2AP35326 72 aa5.28□□□□□ -1.56
RHBDF1-201ENST00000262316 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
RHBDF1-201ENST00000262316 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
RHBDF1-201ENST00000262316 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
RHBDF1-201ENST00000262316 KRTAP5-9P26371 169 aa5.16□□□□□ -1.58
RHBDF1-201ENST00000262316 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
RHBDF1-201ENST00000262316 SPRR2DP22532 72 aa5.04□□□□□ -1.6
RHBDF1-201ENST00000262316 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
RHBDF1-201ENST00000262316 MT1AP04731 61 aa4.95□□□□□ -1.62
RHBDF1-201ENST00000262316 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
RHBDF1-201ENST00000262316 KRTAP5-5Q701N2 237 aaPredicted RBP4.89□□□□□ -1.63
RHBDF1-201ENST00000262316 KRTAP6-3Q3LI67 103 aa4.87□□□□□ -1.63
RHBDF1-201ENST00000262316 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
RHBDF1-201ENST00000262316 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
RHBDF1-201ENST00000262316 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
RHBDF1-201ENST00000262316 NEBP20929 6669 aa4.65□□□□□ -1.66
RHBDF1-201ENST00000262316 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.66
RHBDF1-201ENST00000262316 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
RHBDF1-201ENST00000262316 MT4P47944 62 aa4.61□□□□□ -1.67
RHBDF1-201ENST00000262316 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
RHBDF1-201ENST00000262316 MT3P25713 68 aa4.49□□□□□ -1.69
RHBDF1-201ENST00000262316 PRM1P04553 51 aa4.45□□□□□ -1.7
RHBDF1-201ENST00000262316 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
RHBDF1-201ENST00000262316 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
RHBDF1-201ENST00000262316 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
RHBDF1-201ENST00000262316 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
RHBDF1-201ENST00000262316 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
RHBDF1-201ENST00000262316 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
RHBDF1-201ENST00000262316 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
RHBDF1-201ENST00000262316 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
RHBDF1-201ENST00000262316 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
RHBDF1-201ENST00000262316 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
RHBDF1-201ENST00000262316 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
RHBDF1-201ENST00000262316 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
RHBDF1-201ENST00000262316 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
RHBDF1-201ENST00000262316 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
RHBDF1-201ENST00000262316 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
RHBDF1-201ENST00000262316 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
RHBDF1-201ENST00000262316 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
RHBDF1-201ENST00000262316 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
RHBDF1-201ENST00000262316 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
RHBDF1-201ENST00000262316 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
RHBDF1-201ENST00000262316 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
RHBDF1-201ENST00000262316 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
RHBDF1-201ENST00000262316 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
RHBDF1-201ENST00000262316 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
RHBDF1-201ENST00000262316 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
RHBDF1-201ENST00000262316 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
RHBDF1-201ENST00000262316 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
RHBDF1-201ENST00000262316 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
RHBDF1-201ENST00000262316 KRTAP9-9Q9BYP9 154 aa2.97□□□□□ -1.93
RHBDF1-201ENST00000262316 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
RHBDF1-201ENST00000262316 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
RHBDF1-201ENST00000262316 PHGR1C9JFL3 82 aa2.59□□□□□ -2
RHBDF1-201ENST00000262316 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
RHBDF1-201ENST00000262316 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 693.1 ms