RNA–Protein interactions for RNA: ENST00000262158.6

SMAD7-201, Transcript of SMAD family member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD7, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-201ENST00000262158 KRTAP19-6Q3LI70 58 aa6.48□□□□□ -1.37
SMAD7-201ENST00000262158 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
SMAD7-201ENST00000262158 LCE2DQ5TA82 110 aaPredicted RBP6.46□□□□□ -1.38
SMAD7-201ENST00000262158 MT1GP13640 62 aa6.41□□□□□ -1.38
SMAD7-201ENST00000262158 KRTAP2-3P0C7H8 128 aa6.39□□□□□ -1.39
SMAD7-201ENST00000262158 KRTAP2-4Q9BYR9 128 aa6.39□□□□□ -1.39
SMAD7-201ENST00000262158 KRTAP2-1Q9BYU5 128 aa6.39□□□□□ -1.39
SMAD7-201ENST00000262158 MACF1Q9UPN3 7388 aaKnown RBP6.37□□□□□ -1.39
SMAD7-201ENST00000262158 SYNE2Q8WXH0 6885 aaKnown RBP6.28□□□□□ -1.4
SMAD7-201ENST00000262158 MT1MQ8N339 61 aa6.24□□□□□ -1.41
SMAD7-201ENST00000262158 SYNE1Q8NF91 8797 aaKnown RBP6.23□□□□□ -1.41
SMAD7-201ENST00000262158 KRTAP19-3Q7Z4W3 81 aa6.2□□□□□ -1.42
SMAD7-201ENST00000262158 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
SMAD7-201ENST00000262158 MDN1Q9NU22 5596 aa6.18□□□□□ -1.42
SMAD7-201ENST00000262158 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
SMAD7-201ENST00000262158 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
SMAD7-201ENST00000262158 OBSCNQ5VST9 7968 aa5.96□□□□□ -1.45
SMAD7-201ENST00000262158 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.46
SMAD7-201ENST00000262158 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
SMAD7-201ENST00000262158 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
SMAD7-201ENST00000262158 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
SMAD7-201ENST00000262158 KRTAP9-2Q9BYQ4 174 aa5.73□□□□□ -1.49
SMAD7-201ENST00000262158 LCE1AQ5T7P2 110 aa5.66□□□□□ -1.5
SMAD7-201ENST00000262158 SPRR2EP22531 72 aa5.58□□□□□ -1.52
SMAD7-201ENST00000262158 SPRR2BP35325 72 aa5.58□□□□□ -1.52
SMAD7-201ENST00000262158 SPRR2AP35326 72 aa5.58□□□□□ -1.52
SMAD7-201ENST00000262158 MT1AP04731 61 aa5.49□□□□□ -1.53
SMAD7-201ENST00000262158 KRTAP5-9P26371 169 aa5.46□□□□□ -1.53
SMAD7-201ENST00000262158 KRTAP5-5Q701N2 237 aaPredicted RBP5.42□□□□□ -1.54
SMAD7-201ENST00000262158 LCE3DQ9BYE3 92 aa5.39□□□□□ -1.55
SMAD7-201ENST00000262158 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
SMAD7-201ENST00000262158 SPRR2DP22532 72 aa5.3□□□□□ -1.56
SMAD7-201ENST00000262158 LCE3EQ5T5B0 92 aa5.27□□□□□ -1.57
SMAD7-201ENST00000262158 PRM1P04553 51 aa5.27□□□□□ -1.57
SMAD7-201ENST00000262158 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
SMAD7-201ENST00000262158 KRTAP6-2Q3LI66 62 aa5.19□□□□□ -1.58
SMAD7-201ENST00000262158 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.13□□□□□ -1.59
SMAD7-201ENST00000262158 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
SMAD7-201ENST00000262158 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
SMAD7-201ENST00000262158 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
SMAD7-201ENST00000262158 MT3P25713 68 aa4.93□□□□□ -1.62
SMAD7-201ENST00000262158 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
SMAD7-201ENST00000262158 MT4P47944 62 aa4.88□□□□□ -1.63
SMAD7-201ENST00000262158 NEBP20929 6669 aa4.85□□□□□ -1.63
SMAD7-201ENST00000262158 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
SMAD7-201ENST00000262158 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
SMAD7-201ENST00000262158 KRTAP5-4Q6L8H1 288 aa4.71□□□□□ -1.66
SMAD7-201ENST00000262158 HMCN1Q96RW7 5635 aa4.67□□□□□ -1.66
SMAD7-201ENST00000262158 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
SMAD7-201ENST00000262158 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
SMAD7-201ENST00000262158 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
SMAD7-201ENST00000262158 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
SMAD7-201ENST00000262158 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
SMAD7-201ENST00000262158 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
SMAD7-201ENST00000262158 MUC19Q7Z5P9 8384 aa4.28□□□□□ -1.72
SMAD7-201ENST00000262158 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
SMAD7-201ENST00000262158 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
SMAD7-201ENST00000262158 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
SMAD7-201ENST00000262158 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
SMAD7-201ENST00000262158 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
SMAD7-201ENST00000262158 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
SMAD7-201ENST00000262158 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
SMAD7-201ENST00000262158 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
SMAD7-201ENST00000262158 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
SMAD7-201ENST00000262158 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
SMAD7-201ENST00000262158 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
SMAD7-201ENST00000262158 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
SMAD7-201ENST00000262158 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.86
SMAD7-201ENST00000262158 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
SMAD7-201ENST00000262158 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
SMAD7-201ENST00000262158 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
SMAD7-201ENST00000262158 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
SMAD7-201ENST00000262158 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
SMAD7-201ENST00000262158 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.91
SMAD7-201ENST00000262158 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
SMAD7-201ENST00000262158 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
SMAD7-201ENST00000262158 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms