RNA–Protein interactions for RNA: ENST00000261890.6

RAB11A-201, Transcript of RAB11A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-201ENST00000261890 MT1EP04732 61 aa2.63□□□□□ -1.99
RAB11A-201ENST00000261890 MT1LQ93083 61 aa2.61□□□□□ -1.99
RAB11A-201ENST00000261890 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
RAB11A-201ENST00000261890 USH2AO75445 5202 aa2.56□□□□□ -2
RAB11A-201ENST00000261890 LCE3BQ5TA77 95 aa2.56□□□□□ -2
RAB11A-201ENST00000261890 MT1MQ8N339 61 aa2.53□□□□□ -2
RAB11A-201ENST00000261890 KRTAP6-3Q3LI67 103 aa2.51□□□□□ -2.01
RAB11A-201ENST00000261890 LCE1AQ5T7P2 110 aa2.49□□□□□ -2.01
RAB11A-201ENST00000261890 KRTAP9-7A8MTY7 169 aa2.46□□□□□ -2.01
RAB11A-201ENST00000261890 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.01
RAB11A-201ENST00000261890 MT3P25713 68 aa2.45□□□□□ -2.02
RAB11A-201ENST00000261890 KRTAP19-7Q3SYF9 63 aa2.44□□□□□ -2.02
RAB11A-201ENST00000261890 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
RAB11A-201ENST00000261890 KRTAP4-7Q9BYR0 210 aa2.43□□□□□ -2.02
RAB11A-201ENST00000261890 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
RAB11A-201ENST00000261890 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.41□□□□□ -2.02
RAB11A-201ENST00000261890 KRTAP2-3P0C7H8 128 aa2.4□□□□□ -2.03
RAB11A-201ENST00000261890 KRTAP2-4Q9BYR9 128 aa2.4□□□□□ -2.03
RAB11A-201ENST00000261890 MT4P47944 62 aa2.39□□□□□ -2.03
RAB11A-201ENST00000261890 KMT2DO14686 5537 aa2.39□□□□□ -2.03
RAB11A-201ENST00000261890 MT1AP04731 61 aa2.37□□□□□ -2.03
RAB11A-201ENST00000261890 LCE4AQ5TA78 99 aa2.32□□□□□ -2.04
RAB11A-201ENST00000261890 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
RAB11A-201ENST00000261890 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
RAB11A-201ENST00000261890 KRTAP2-1Q9BYU5 128 aa2.32□□□□□ -2.04
RAB11A-201ENST00000261890 LCE5AQ5TCM9 118 aa2.31□□□□□ -2.04
RAB11A-201ENST00000261890 LOC100996750A0A140TA64 210 aa2.29□□□□□ -2.04
RAB11A-201ENST00000261890 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
RAB11A-201ENST00000261890 SYNE2Q8WXH0 6885 aaKnown RBP2.25□□□□□ -2.05
RAB11A-201ENST00000261890 LCE1DQ5T752 114 aa2.2□□□□□ -2.06
RAB11A-201ENST00000261890 KRTAP9-4Q9BYQ2 154 aa2.19□□□□□ -2.06
RAB11A-201ENST00000261890 KRTAP5-9P26371 169 aa2.18□□□□□ -2.06
RAB11A-201ENST00000261890 FCGBPQ9Y6R7 5405 aaPredicted RBP2.18□□□□□ -2.06
RAB11A-201ENST00000261890 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
RAB11A-201ENST00000261890 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
RAB11A-201ENST00000261890 MACF1Q9UPN3 7388 aaKnown RBP2.17□□□□□ -2.06
RAB11A-201ENST00000261890 MUC12Q9UKN1 5478 aa2.17□□□□□ -2.06
RAB11A-201ENST00000261890 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
RAB11A-201ENST00000261890 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
RAB11A-201ENST00000261890 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
RAB11A-201ENST00000261890 KRTAP4-6Q9BYQ5 205 aa2.1□□□□□ -2.07
RAB11A-201ENST00000261890 KRTAP4-9Q9BYQ8 210 aa2.1□□□□□ -2.07
RAB11A-201ENST00000261890 PRM1P04553 51 aa2.08□□□□□ -2.08
RAB11A-201ENST00000261890 KRTAP9-6A8MVA2 160 aa2.08□□□□□ -2.08
RAB11A-201ENST00000261890 MDN1Q9NU22 5596 aa2.04□□□□□ -2.08
RAB11A-201ENST00000261890 NEBP20929 6669 aa2.04□□□□□ -2.08
RAB11A-201ENST00000261890 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
RAB11A-201ENST00000261890 KRTAP9-9Q9BYP9 154 aa1.93□□□□□ -2.1
RAB11A-201ENST00000261890 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
RAB11A-201ENST00000261890 KRTAP5-4Q6L8H1 288 aa1.87□□□□□ -2.11
RAB11A-201ENST00000261890 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
RAB11A-201ENST00000261890 LCE1EQ5T753 118 aa1.84□□□□□ -2.11
RAB11A-201ENST00000261890 LCE1FQ5T754 118 aa1.84□□□□□ -2.11
RAB11A-201ENST00000261890 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
RAB11A-201ENST00000261890 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
RAB11A-201ENST00000261890 KRTAP4-11Q9BYQ6 195 aa1.73□□□□□ -2.13
RAB11A-201ENST00000261890 KRTAP5-3Q6L8H2 238 aa1.71□□□□□ -2.14
RAB11A-201ENST00000261890 KRTAP4-12Q9BQ66 201 aa1.67□□□□□ -2.14
RAB11A-201ENST00000261890 KRTAP4-2Q9BYR5 136 aa1.65□□□□□ -2.15
RAB11A-201ENST00000261890 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
RAB11A-201ENST00000261890 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
RAB11A-201ENST00000261890 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
RAB11A-201ENST00000261890 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
RAB11A-201ENST00000261890 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
RAB11A-201ENST00000261890 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
RAB11A-201ENST00000261890 KRTAP4-4Q9BYR3 166 aa1.45□□□□□ -2.18
RAB11A-201ENST00000261890 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
RAB11A-201ENST00000261890 KRTAP5-11Q6L8G4 156 aa1.31□□□□□ -2.2
RAB11A-201ENST00000261890 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
RAB11A-201ENST00000261890 KRTAP5-1Q6L8H4 278 aa1.29□□□□□ -2.2
RAB11A-201ENST00000261890 KRTAP5-10Q6L8G5 202 aa1.29□□□□□ -2.2
RAB11A-201ENST00000261890 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
RAB11A-201ENST00000261890 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
RAB11A-201ENST00000261890 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
RAB11A-201ENST00000261890 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
RAB11A-201ENST00000261890 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
RAB11A-201ENST00000261890 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 88.6 ms