RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 LCE3BQ5TA77 95 aa3.43□□□□□ -1.86
PALB2-201ENST00000261584 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
PALB2-201ENST00000261584 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
PALB2-201ENST00000261584 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
PALB2-201ENST00000261584 LCE2AQ5TA79 106 aaPredicted RBP3.35□□□□□ -1.87
PALB2-201ENST00000261584 MT1LQ93083 61 aa3.35□□□□□ -1.87
PALB2-201ENST00000261584 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
PALB2-201ENST00000261584 MT1EP04732 61 aa3.31□□□□□ -1.88
PALB2-201ENST00000261584 SSPOA2VEC9 5147 aa3.3□□□□□ -1.88
PALB2-201ENST00000261584 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
PALB2-201ENST00000261584 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
PALB2-201ENST00000261584 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
PALB2-201ENST00000261584 MT1MQ8N339 61 aa3.14□□□□□ -1.91
PALB2-201ENST00000261584 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
PALB2-201ENST00000261584 MACF1Q9UPN3 7388 aaKnown RBP3.13□□□□□ -1.91
PALB2-201ENST00000261584 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
PALB2-201ENST00000261584 LCE2DQ5TA82 110 aaPredicted RBP3.05□□□□□ -1.92
PALB2-201ENST00000261584 PRM1P04553 51 aa3.04□□□□□ -1.92
PALB2-201ENST00000261584 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
PALB2-201ENST00000261584 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
PALB2-201ENST00000261584 KRTAP9-7A8MTY7 169 aa2.99□□□□□ -1.93
PALB2-201ENST00000261584 SPRR2EP22531 72 aa2.98□□□□□ -1.93
PALB2-201ENST00000261584 SPRR2BP35325 72 aa2.98□□□□□ -1.93
PALB2-201ENST00000261584 SPRR2AP35326 72 aa2.98□□□□□ -1.93
PALB2-201ENST00000261584 KRTAP19-6Q3LI70 58 aa2.96□□□□□ -1.94
PALB2-201ENST00000261584 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
PALB2-201ENST00000261584 KRTAP19-4Q3LI73 84 aa2.89□□□□□ -1.95
PALB2-201ENST00000261584 KRTAP9-2Q9BYQ4 174 aa2.86□□□□□ -1.95
PALB2-201ENST00000261584 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
PALB2-201ENST00000261584 SPRR2DP22532 72 aa2.82□□□□□ -1.96
PALB2-201ENST00000261584 LCE5AQ5TCM9 118 aa2.82□□□□□ -1.96
PALB2-201ENST00000261584 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
PALB2-201ENST00000261584 MT1AP04731 61 aa2.76□□□□□ -1.97
PALB2-201ENST00000261584 MT4P47944 62 aa2.74□□□□□ -1.97
PALB2-201ENST00000261584 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
PALB2-201ENST00000261584 MT3P25713 68 aa2.65□□□□□ -1.98
PALB2-201ENST00000261584 LCE1DQ5T752 114 aa2.62□□□□□ -1.99
PALB2-201ENST00000261584 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
PALB2-201ENST00000261584 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
PALB2-201ENST00000261584 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
PALB2-201ENST00000261584 KRTAP9-4Q9BYQ2 154 aa2.58□□□□□ -2
PALB2-201ENST00000261584 KRTAP2-2Q9BYT5 123 aa2.48□□□□□ -2.01
PALB2-201ENST00000261584 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
PALB2-201ENST00000261584 KRTAP9-6A0A140TA67 174 aa2.43□□□□□ -2.02
PALB2-201ENST00000261584 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
PALB2-201ENST00000261584 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
PALB2-201ENST00000261584 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.38□□□□□ -2.03
PALB2-201ENST00000261584 KRTAP4-11Q9BYQ6 195 aa2.38□□□□□ -2.03
PALB2-201ENST00000261584 NEBP20929 6669 aa2.36□□□□□ -2.03
PALB2-201ENST00000261584 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
PALB2-201ENST00000261584 KRTAP5-4Q6L8H1 288 aa2.25□□□□□ -2.05
PALB2-201ENST00000261584 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
PALB2-201ENST00000261584 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
PALB2-201ENST00000261584 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
PALB2-201ENST00000261584 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
PALB2-201ENST00000261584 LCE4AQ5TA78 99 aa2.03□□□□□ -2.08
PALB2-201ENST00000261584 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
PALB2-201ENST00000261584 KRTAP4-12Q9BQ66 201 aa2.02□□□□□ -2.09
PALB2-201ENST00000261584 KRTAP4-2Q9BYR5 136 aa2.02□□□□□ -2.09
PALB2-201ENST00000261584 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
PALB2-201ENST00000261584 KRTAP20-1Q3LI63 56 aa1.96□□□□□ -2.1
PALB2-201ENST00000261584 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
PALB2-201ENST00000261584 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
PALB2-201ENST00000261584 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
PALB2-201ENST00000261584 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
PALB2-201ENST00000261584 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
PALB2-201ENST00000261584 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
PALB2-201ENST00000261584 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
PALB2-201ENST00000261584 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
PALB2-201ENST00000261584 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
PALB2-201ENST00000261584 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
PALB2-201ENST00000261584 KRTAP9-9Q9BYP9 154 aa1.65□□□□□ -2.15
PALB2-201ENST00000261584 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
PALB2-201ENST00000261584 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
PALB2-201ENST00000261584 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
PALB2-201ENST00000261584 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
PALB2-201ENST00000261584 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 140.6 ms