RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
LPCAT3-201ENST00000261407 KRTAP2-3P0C7H8 128 aa6.43□□□□□ -1.38
LPCAT3-201ENST00000261407 KRTAP2-4Q9BYR9 128 aa6.43□□□□□ -1.38
LPCAT3-201ENST00000261407 KRTAP2-1Q9BYU5 128 aa6.43□□□□□ -1.38
LPCAT3-201ENST00000261407 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
LPCAT3-201ENST00000261407 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
LPCAT3-201ENST00000261407 MT1GP13640 62 aa6.31□□□□□ -1.4
LPCAT3-201ENST00000261407 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
LPCAT3-201ENST00000261407 KRTAP19-3Q7Z4W3 81 aa6.29□□□□□ -1.4
LPCAT3-201ENST00000261407 MT1MQ8N339 61 aa6.28□□□□□ -1.4
LPCAT3-201ENST00000261407 MACF1Q9UPN3 7388 aaKnown RBP6.24□□□□□ -1.41
LPCAT3-201ENST00000261407 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
LPCAT3-201ENST00000261407 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
LPCAT3-201ENST00000261407 SPRR2FQ96RM1 72 aa6.17□□□□□ -1.42
LPCAT3-201ENST00000261407 SYNE2Q8WXH0 6885 aaKnown RBP6.12□□□□□ -1.43
LPCAT3-201ENST00000261407 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
LPCAT3-201ENST00000261407 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
LPCAT3-201ENST00000261407 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
LPCAT3-201ENST00000261407 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
LPCAT3-201ENST00000261407 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
LPCAT3-201ENST00000261407 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.73□□□□□ -1.49
LPCAT3-201ENST00000261407 KRTAP6-1Q3LI64 71 aa5.73□□□□□ -1.49
LPCAT3-201ENST00000261407 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
LPCAT3-201ENST00000261407 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
LPCAT3-201ENST00000261407 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
LPCAT3-201ENST00000261407 SPRR2EP22531 72 aa5.62□□□□□ -1.51
LPCAT3-201ENST00000261407 SPRR2BP35325 72 aa5.62□□□□□ -1.51
LPCAT3-201ENST00000261407 SPRR2AP35326 72 aa5.62□□□□□ -1.51
LPCAT3-201ENST00000261407 MT1AP04731 61 aa5.58□□□□□ -1.52
LPCAT3-201ENST00000261407 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
LPCAT3-201ENST00000261407 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
LPCAT3-201ENST00000261407 KRTAP6-3Q3LI67 103 aa5.48□□□□□ -1.53
LPCAT3-201ENST00000261407 SPRR2DP22532 72 aa5.36□□□□□ -1.55
LPCAT3-201ENST00000261407 LCE3DQ9BYE3 92 aa5.36□□□□□ -1.55
LPCAT3-201ENST00000261407 OBSCNQ5VST9 7968 aa5.3□□□□□ -1.56
LPCAT3-201ENST00000261407 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
LPCAT3-201ENST00000261407 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
LPCAT3-201ENST00000261407 NEBP20929 6669 aa5.2□□□□□ -1.58
LPCAT3-201ENST00000261407 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.58
LPCAT3-201ENST00000261407 PRM1P04553 51 aa5.04□□□□□ -1.6
LPCAT3-201ENST00000261407 MT3P25713 68 aa5.01□□□□□ -1.61
LPCAT3-201ENST00000261407 KRTAP20-1Q3LI63 56 aa4.93□□□□□ -1.62
LPCAT3-201ENST00000261407 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
LPCAT3-201ENST00000261407 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
LPCAT3-201ENST00000261407 MT4P47944 62 aa4.8□□□□□ -1.64
LPCAT3-201ENST00000261407 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
LPCAT3-201ENST00000261407 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.66
LPCAT3-201ENST00000261407 HMCN1Q96RW7 5635 aa4.63□□□□□ -1.67
LPCAT3-201ENST00000261407 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
LPCAT3-201ENST00000261407 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
LPCAT3-201ENST00000261407 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
LPCAT3-201ENST00000261407 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
LPCAT3-201ENST00000261407 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
LPCAT3-201ENST00000261407 GPR98Q8WXG9 6306 aa4.17□□□□□ -1.74
LPCAT3-201ENST00000261407 LCE1BQ5T7P3 118 aa4.15□□□□□ -1.75
LPCAT3-201ENST00000261407 LCE1EQ5T753 118 aa4.09□□□□□ -1.76
LPCAT3-201ENST00000261407 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
LPCAT3-201ENST00000261407 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
LPCAT3-201ENST00000261407 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
LPCAT3-201ENST00000261407 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
LPCAT3-201ENST00000261407 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
LPCAT3-201ENST00000261407 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
LPCAT3-201ENST00000261407 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
LPCAT3-201ENST00000261407 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
LPCAT3-201ENST00000261407 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
LPCAT3-201ENST00000261407 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
LPCAT3-201ENST00000261407 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
LPCAT3-201ENST00000261407 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
LPCAT3-201ENST00000261407 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.85
LPCAT3-201ENST00000261407 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
LPCAT3-201ENST00000261407 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
LPCAT3-201ENST00000261407 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
LPCAT3-201ENST00000261407 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
LPCAT3-201ENST00000261407 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
LPCAT3-201ENST00000261407 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
LPCAT3-201ENST00000261407 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
LPCAT3-201ENST00000261407 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 5.5 ms