RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CRCT1Q9UGL9 99 aa5.3□□□□□ -1.56
LMNB1-201ENST00000261366 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
LMNB1-201ENST00000261366 DSTQ03001 7570 aaKnown RBP5.24□□□□□ -1.57
LMNB1-201ENST00000261366 MUC12Q9UKN1 5478 aa5.24□□□□□ -1.57
LMNB1-201ENST00000261366 FCGBPQ9Y6R7 5405 aaPredicted RBP5.22□□□□□ -1.57
LMNB1-201ENST00000261366 MT1GP13640 62 aa5.21□□□□□ -1.58
LMNB1-201ENST00000261366 LCE2DQ5TA82 110 aaPredicted RBP5.12□□□□□ -1.59
LMNB1-201ENST00000261366 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
LMNB1-201ENST00000261366 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
LMNB1-201ENST00000261366 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
LMNB1-201ENST00000261366 MACF1Q9UPN3 7388 aaKnown RBP5.01□□□□□ -1.61
LMNB1-201ENST00000261366 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
LMNB1-201ENST00000261366 MT1MQ8N339 61 aa4.97□□□□□ -1.61
LMNB1-201ENST00000261366 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
LMNB1-201ENST00000261366 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
LMNB1-201ENST00000261366 SYNE2Q8WXH0 6885 aaKnown RBP4.93□□□□□ -1.62
LMNB1-201ENST00000261366 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
LMNB1-201ENST00000261366 SPRR2FQ96RM1 72 aa4.92□□□□□ -1.62
LMNB1-201ENST00000261366 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
LMNB1-201ENST00000261366 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
LMNB1-201ENST00000261366 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
LMNB1-201ENST00000261366 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
LMNB1-201ENST00000261366 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
LMNB1-201ENST00000261366 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
LMNB1-201ENST00000261366 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.67
LMNB1-201ENST00000261366 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
LMNB1-201ENST00000261366 PRM1P04553 51 aa4.56□□□□□ -1.68
LMNB1-201ENST00000261366 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
LMNB1-201ENST00000261366 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
LMNB1-201ENST00000261366 SPRR2EP22531 72 aa4.51□□□□□ -1.69
LMNB1-201ENST00000261366 SPRR2BP35325 72 aa4.51□□□□□ -1.69
LMNB1-201ENST00000261366 SPRR2AP35326 72 aa4.51□□□□□ -1.69
LMNB1-201ENST00000261366 MT1AP04731 61 aa4.49□□□□□ -1.69
LMNB1-201ENST00000261366 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
LMNB1-201ENST00000261366 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
LMNB1-201ENST00000261366 SPRR2DP22532 72 aa4.32□□□□□ -1.72
LMNB1-201ENST00000261366 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
LMNB1-201ENST00000261366 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
LMNB1-201ENST00000261366 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
LMNB1-201ENST00000261366 NEBP20929 6669 aa4.04□□□□□ -1.76
LMNB1-201ENST00000261366 MT3P25713 68 aa3.99□□□□□ -1.77
LMNB1-201ENST00000261366 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
LMNB1-201ENST00000261366 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
LMNB1-201ENST00000261366 MT4P47944 62 aa3.86□□□□□ -1.79
LMNB1-201ENST00000261366 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
LMNB1-201ENST00000261366 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
LMNB1-201ENST00000261366 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
LMNB1-201ENST00000261366 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
LMNB1-201ENST00000261366 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
LMNB1-201ENST00000261366 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
LMNB1-201ENST00000261366 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.84
LMNB1-201ENST00000261366 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
LMNB1-201ENST00000261366 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
LMNB1-201ENST00000261366 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
LMNB1-201ENST00000261366 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
LMNB1-201ENST00000261366 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
LMNB1-201ENST00000261366 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
LMNB1-201ENST00000261366 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
LMNB1-201ENST00000261366 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
LMNB1-201ENST00000261366 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
LMNB1-201ENST00000261366 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
LMNB1-201ENST00000261366 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
LMNB1-201ENST00000261366 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
LMNB1-201ENST00000261366 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
LMNB1-201ENST00000261366 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
LMNB1-201ENST00000261366 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.93
LMNB1-201ENST00000261366 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
LMNB1-201ENST00000261366 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
LMNB1-201ENST00000261366 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
LMNB1-201ENST00000261366 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
LMNB1-201ENST00000261366 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.94
LMNB1-201ENST00000261366 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
LMNB1-201ENST00000261366 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
LMNB1-201ENST00000261366 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
LMNB1-201ENST00000261366 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
LMNB1-201ENST00000261366 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
LMNB1-201ENST00000261366 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 118.1 ms