RNA–Protein interactions for RNA: ENST00000261024.6

SLC40A1-201, Transcript of solute carrier family 40 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC40A1, Length 3,442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-201ENST00000261024 MT1LQ93083 61 aa4.9□□□□□ -1.63
SLC40A1-201ENST00000261024 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
SLC40A1-201ENST00000261024 CRCT1Q9UGL9 99 aa4.85□□□□□ -1.63
SLC40A1-201ENST00000261024 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
SLC40A1-201ENST00000261024 SSPOA2VEC9 5147 aa4.82□□□□□ -1.64
SLC40A1-201ENST00000261024 MT1EP04732 61 aa4.8□□□□□ -1.64
SLC40A1-201ENST00000261024 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
SLC40A1-201ENST00000261024 MT1GP13640 62 aa4.76□□□□□ -1.65
SLC40A1-201ENST00000261024 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
SLC40A1-201ENST00000261024 KRTAP19-4Q3LI73 84 aa4.72□□□□□ -1.65
SLC40A1-201ENST00000261024 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
SLC40A1-201ENST00000261024 LCE3BQ5TA77 95 aa4.59□□□□□ -1.67
SLC40A1-201ENST00000261024 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
SLC40A1-201ENST00000261024 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
SLC40A1-201ENST00000261024 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
SLC40A1-201ENST00000261024 PRM1P04553 51 aa4.47□□□□□ -1.69
SLC40A1-201ENST00000261024 MT1MQ8N339 61 aa4.47□□□□□ -1.69
SLC40A1-201ENST00000261024 LCE2AQ5TA79 106 aaPredicted RBP4.45□□□□□ -1.7
SLC40A1-201ENST00000261024 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
SLC40A1-201ENST00000261024 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
SLC40A1-201ENST00000261024 MDN1Q9NU22 5596 aa4.36□□□□□ -1.71
SLC40A1-201ENST00000261024 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
SLC40A1-201ENST00000261024 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
SLC40A1-201ENST00000261024 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
SLC40A1-201ENST00000261024 MT1AP04731 61 aa4.28□□□□□ -1.72
SLC40A1-201ENST00000261024 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
SLC40A1-201ENST00000261024 KRTAP6-3Q3LI67 103 aa4.21□□□□□ -1.74
SLC40A1-201ENST00000261024 KRTAP9-6A0A140TA67 174 aa4.2□□□□□ -1.74
SLC40A1-201ENST00000261024 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
SLC40A1-201ENST00000261024 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
SLC40A1-201ENST00000261024 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
SLC40A1-201ENST00000261024 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
SLC40A1-201ENST00000261024 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
SLC40A1-201ENST00000261024 SPRR2EP22531 72 aa3.88□□□□□ -1.79
SLC40A1-201ENST00000261024 SPRR2BP35325 72 aa3.88□□□□□ -1.79
SLC40A1-201ENST00000261024 SPRR2AP35326 72 aa3.88□□□□□ -1.79
SLC40A1-201ENST00000261024 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
SLC40A1-201ENST00000261024 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
SLC40A1-201ENST00000261024 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
SLC40A1-201ENST00000261024 SPRR2DP22532 72 aa3.67□□□□□ -1.82
SLC40A1-201ENST00000261024 MT3P25713 68 aa3.64□□□□□ -1.83
SLC40A1-201ENST00000261024 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.84
SLC40A1-201ENST00000261024 MT4P47944 62 aa3.58□□□□□ -1.84
SLC40A1-201ENST00000261024 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
SLC40A1-201ENST00000261024 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
SLC40A1-201ENST00000261024 NEBP20929 6669 aa3.44□□□□□ -1.86
SLC40A1-201ENST00000261024 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
SLC40A1-201ENST00000261024 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
SLC40A1-201ENST00000261024 MUC5ACP98088 5654 aa3.21□□□□□ -1.89
SLC40A1-201ENST00000261024 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
SLC40A1-201ENST00000261024 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
SLC40A1-201ENST00000261024 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
SLC40A1-201ENST00000261024 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
SLC40A1-201ENST00000261024 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
SLC40A1-201ENST00000261024 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
SLC40A1-201ENST00000261024 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
SLC40A1-201ENST00000261024 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
SLC40A1-201ENST00000261024 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
SLC40A1-201ENST00000261024 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
SLC40A1-201ENST00000261024 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.95
SLC40A1-201ENST00000261024 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
SLC40A1-201ENST00000261024 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
SLC40A1-201ENST00000261024 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
SLC40A1-201ENST00000261024 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
SLC40A1-201ENST00000261024 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
SLC40A1-201ENST00000261024 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
SLC40A1-201ENST00000261024 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
SLC40A1-201ENST00000261024 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.98
SLC40A1-201ENST00000261024 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
SLC40A1-201ENST00000261024 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
SLC40A1-201ENST00000261024 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
SLC40A1-201ENST00000261024 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
SLC40A1-201ENST00000261024 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
SLC40A1-201ENST00000261024 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
SLC40A1-201ENST00000261024 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
SLC40A1-201ENST00000261024 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
SLC40A1-201ENST00000261024 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms