RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
CDK4-201ENST00000257904 MT1LQ93083 61 aa5.82□□□□□ -1.48
CDK4-201ENST00000257904 MT1EP04732 61 aa5.79□□□□□ -1.48
CDK4-201ENST00000257904 CRCT1Q9UGL9 99 aa5.66□□□□□ -1.5
CDK4-201ENST00000257904 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
CDK4-201ENST00000257904 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
CDK4-201ENST00000257904 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
CDK4-201ENST00000257904 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
CDK4-201ENST00000257904 MT1GP13640 62 aa5.44□□□□□ -1.54
CDK4-201ENST00000257904 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
CDK4-201ENST00000257904 KRTAP9-6A0A140TA67 174 aa5.41□□□□□ -1.54
CDK4-201ENST00000257904 MT1MQ8N339 61 aa5.39□□□□□ -1.55
CDK4-201ENST00000257904 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
CDK4-201ENST00000257904 SYNE2Q8WXH0 6885 aaKnown RBP5.38□□□□□ -1.55
CDK4-201ENST00000257904 KRTAP5-9P26371 169 aa5.31□□□□□ -1.56
CDK4-201ENST00000257904 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
CDK4-201ENST00000257904 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
CDK4-201ENST00000257904 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
CDK4-201ENST00000257904 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
CDK4-201ENST00000257904 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
CDK4-201ENST00000257904 KRTAP6-3Q3LI67 103 aa5.14□□□□□ -1.59
CDK4-201ENST00000257904 SPRR2EP22531 72 aa5.1□□□□□ -1.59
CDK4-201ENST00000257904 SPRR2BP35325 72 aa5.1□□□□□ -1.59
CDK4-201ENST00000257904 SPRR2AP35326 72 aa5.1□□□□□ -1.59
CDK4-201ENST00000257904 DSTQ03001 7570 aaKnown RBP5.08□□□□□ -1.6
CDK4-201ENST00000257904 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
CDK4-201ENST00000257904 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
CDK4-201ENST00000257904 MT1AP04731 61 aa4.98□□□□□ -1.61
CDK4-201ENST00000257904 KRTAP9-7A8MTY7 169 aa4.95□□□□□ -1.62
CDK4-201ENST00000257904 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
CDK4-201ENST00000257904 SPRR2DP22532 72 aa4.9□□□□□ -1.62
CDK4-201ENST00000257904 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.62
CDK4-201ENST00000257904 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
CDK4-201ENST00000257904 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.64
CDK4-201ENST00000257904 NEBP20929 6669 aa4.81□□□□□ -1.64
CDK4-201ENST00000257904 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
CDK4-201ENST00000257904 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
CDK4-201ENST00000257904 PRM1P04553 51 aa4.66□□□□□ -1.66
CDK4-201ENST00000257904 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
CDK4-201ENST00000257904 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
CDK4-201ENST00000257904 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
CDK4-201ENST00000257904 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
CDK4-201ENST00000257904 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
CDK4-201ENST00000257904 MT3P25713 68 aa4.36□□□□□ -1.71
CDK4-201ENST00000257904 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
CDK4-201ENST00000257904 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
CDK4-201ENST00000257904 MT4P47944 62 aa4.28□□□□□ -1.72
CDK4-201ENST00000257904 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
CDK4-201ENST00000257904 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
CDK4-201ENST00000257904 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
CDK4-201ENST00000257904 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
CDK4-201ENST00000257904 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
CDK4-201ENST00000257904 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
CDK4-201ENST00000257904 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
CDK4-201ENST00000257904 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
CDK4-201ENST00000257904 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
CDK4-201ENST00000257904 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
CDK4-201ENST00000257904 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
CDK4-201ENST00000257904 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
CDK4-201ENST00000257904 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
CDK4-201ENST00000257904 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
CDK4-201ENST00000257904 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
CDK4-201ENST00000257904 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
CDK4-201ENST00000257904 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
CDK4-201ENST00000257904 LCE1CQ5T751 118 aa3.4□□□□□ -1.86
CDK4-201ENST00000257904 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
CDK4-201ENST00000257904 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
CDK4-201ENST00000257904 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
CDK4-201ENST00000257904 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
CDK4-201ENST00000257904 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
CDK4-201ENST00000257904 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
CDK4-201ENST00000257904 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
CDK4-201ENST00000257904 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
CDK4-201ENST00000257904 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
CDK4-201ENST00000257904 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
CDK4-201ENST00000257904 PHGR1C9JFL3 82 aa2.57□□□□□ -2
CDK4-201ENST00000257904 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms