RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
TRAFD1-201ENST00000257604 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
TRAFD1-201ENST00000257604 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.58
TRAFD1-201ENST00000257604 MT1EP04732 61 aa5.12□□□□□ -1.59
TRAFD1-201ENST00000257604 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
TRAFD1-201ENST00000257604 MT1LQ93083 61 aa5.08□□□□□ -1.6
TRAFD1-201ENST00000257604 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
TRAFD1-201ENST00000257604 KRTAP9-2Q9BYQ4 174 aa5□□□□□ -1.61
TRAFD1-201ENST00000257604 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
TRAFD1-201ENST00000257604 MDN1Q9NU22 5596 aa4.96□□□□□ -1.62
TRAFD1-201ENST00000257604 MT1GP13640 62 aa4.94□□□□□ -1.62
TRAFD1-201ENST00000257604 KRTAP2-3P0C7H8 128 aa4.85□□□□□ -1.63
TRAFD1-201ENST00000257604 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
TRAFD1-201ENST00000257604 KRTAP2-4Q9BYR9 128 aa4.85□□□□□ -1.63
TRAFD1-201ENST00000257604 KRTAP2-1Q9BYU5 128 aa4.85□□□□□ -1.63
TRAFD1-201ENST00000257604 MT1MQ8N339 61 aa4.82□□□□□ -1.64
TRAFD1-201ENST00000257604 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
TRAFD1-201ENST00000257604 SPRR2EP22531 72 aa4.63□□□□□ -1.67
TRAFD1-201ENST00000257604 SPRR2BP35325 72 aa4.63□□□□□ -1.67
TRAFD1-201ENST00000257604 SPRR2AP35326 72 aa4.63□□□□□ -1.67
TRAFD1-201ENST00000257604 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
TRAFD1-201ENST00000257604 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
TRAFD1-201ENST00000257604 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
TRAFD1-201ENST00000257604 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
TRAFD1-201ENST00000257604 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
TRAFD1-201ENST00000257604 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
TRAFD1-201ENST00000257604 SPRR2DP22532 72 aa4.42□□□□□ -1.7
TRAFD1-201ENST00000257604 KRTAP5-9P26371 169 aa4.41□□□□□ -1.7
TRAFD1-201ENST00000257604 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.71
TRAFD1-201ENST00000257604 KRTAP6-1Q3LI64 71 aa4.39□□□□□ -1.71
TRAFD1-201ENST00000257604 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
TRAFD1-201ENST00000257604 MT1AP04731 61 aa4.21□□□□□ -1.74
TRAFD1-201ENST00000257604 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
TRAFD1-201ENST00000257604 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
TRAFD1-201ENST00000257604 PRM1P04553 51 aa4.09□□□□□ -1.76
TRAFD1-201ENST00000257604 NEBP20929 6669 aa4.09□□□□□ -1.76
TRAFD1-201ENST00000257604 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
TRAFD1-201ENST00000257604 MT4P47944 62 aa4.07□□□□□ -1.76
TRAFD1-201ENST00000257604 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
TRAFD1-201ENST00000257604 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
TRAFD1-201ENST00000257604 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
TRAFD1-201ENST00000257604 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
TRAFD1-201ENST00000257604 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
TRAFD1-201ENST00000257604 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
TRAFD1-201ENST00000257604 MT3P25713 68 aa3.86□□□□□ -1.79
TRAFD1-201ENST00000257604 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
TRAFD1-201ENST00000257604 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
TRAFD1-201ENST00000257604 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
TRAFD1-201ENST00000257604 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
TRAFD1-201ENST00000257604 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
TRAFD1-201ENST00000257604 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
TRAFD1-201ENST00000257604 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
TRAFD1-201ENST00000257604 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.86
TRAFD1-201ENST00000257604 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
TRAFD1-201ENST00000257604 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
TRAFD1-201ENST00000257604 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
TRAFD1-201ENST00000257604 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
TRAFD1-201ENST00000257604 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
TRAFD1-201ENST00000257604 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
TRAFD1-201ENST00000257604 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
TRAFD1-201ENST00000257604 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
TRAFD1-201ENST00000257604 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
TRAFD1-201ENST00000257604 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
TRAFD1-201ENST00000257604 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
TRAFD1-201ENST00000257604 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
TRAFD1-201ENST00000257604 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
TRAFD1-201ENST00000257604 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
TRAFD1-201ENST00000257604 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
TRAFD1-201ENST00000257604 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
TRAFD1-201ENST00000257604 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
TRAFD1-201ENST00000257604 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
TRAFD1-201ENST00000257604 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -2
TRAFD1-201ENST00000257604 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
TRAFD1-201ENST00000257604 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
TRAFD1-201ENST00000257604 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
TRAFD1-201ENST00000257604 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
TRAFD1-201ENST00000257604 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms