RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 KRTAP9-3Q9BYQ3 159 aa2.82□□□□□ -1.96
DSG3-201ENST00000257189 ABCA13Q86UQ4 5058 aa2.8□□□□□ -1.96
DSG3-201ENST00000257189 MT1GP13640 62 aa2.79□□□□□ -1.96
DSG3-201ENST00000257189 TNXBP22105 4242 aa2.79□□□□□ -1.96
DSG3-201ENST00000257189 MACF1Q9UPN3 7388 aaKnown RBP2.79□□□□□ -1.96
DSG3-201ENST00000257189 MUC2Q02817 5179 aa2.75□□□□□ -1.97
DSG3-201ENST00000257189 KRTAP4-9Q9BYQ8 210 aa2.72□□□□□ -1.97
DSG3-201ENST00000257189 MT1XP80297 61 aa2.71□□□□□ -1.98
DSG3-201ENST00000257189 RNF213Q63HN8 5207 aa2.71□□□□□ -1.98
DSG3-201ENST00000257189 MT1BP07438 61 aa2.7□□□□□ -1.98
DSG3-201ENST00000257189 FAT4Q6V0I7 4981 aa2.68□□□□□ -1.98
DSG3-201ENST00000257189 NEBP20929 6669 aa2.67□□□□□ -1.98
DSG3-201ENST00000257189 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
DSG3-201ENST00000257189 MT1LQ93083 61 aa2.66□□□□□ -1.98
DSG3-201ENST00000257189 LCE1AQ5T7P2 110 aa2.63□□□□□ -1.99
DSG3-201ENST00000257189 MUC17Q685J3 4493 aa2.62□□□□□ -1.99
DSG3-201ENST00000257189 PRM1P04553 51 aa2.6□□□□□ -1.99
DSG3-201ENST00000257189 LCE4AQ5TA78 99 aa2.6□□□□□ -1.99
DSG3-201ENST00000257189 KRTAP19-2Q3LHN2 52 aa2.59□□□□□ -1.99
DSG3-201ENST00000257189 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
DSG3-201ENST00000257189 KRTAP4-8A0A0G2JLE6 195 aa2.58□□□□□ -2
DSG3-201ENST00000257189 KRTAP4-8Q9BYQ9 185 aa2.58□□□□□ -2
DSG3-201ENST00000257189 LCE5AQ5TCM9 118 aa2.57□□□□□ -2
DSG3-201ENST00000257189 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
DSG3-201ENST00000257189 KRTAP4-7Q9BYR0 210 aa2.56□□□□□ -2
DSG3-201ENST00000257189 LCE1DQ5T752 114 aa2.55□□□□□ -2
DSG3-201ENST00000257189 MT1EP04732 61 aa2.55□□□□□ -2
DSG3-201ENST00000257189 HMCN2Q8NDA2 5059 aa2.54□□□□□ -2
DSG3-201ENST00000257189 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
DSG3-201ENST00000257189 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
DSG3-201ENST00000257189 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
DSG3-201ENST00000257189 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
DSG3-201ENST00000257189 LOC100996750A0A140TA64 210 aa2.45□□□□□ -2.02
DSG3-201ENST00000257189 MT1MQ8N339 61 aa2.44□□□□□ -2.02
DSG3-201ENST00000257189 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
DSG3-201ENST00000257189 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
DSG3-201ENST00000257189 USH2AO75445 5202 aa2.41□□□□□ -2.02
DSG3-201ENST00000257189 MT1AP04731 61 aa2.38□□□□□ -2.03
DSG3-201ENST00000257189 KMT2DO14686 5537 aa2.36□□□□□ -2.03
DSG3-201ENST00000257189 DSTQ03001 7570 aaKnown RBP2.33□□□□□ -2.04
DSG3-201ENST00000257189 FCGBPQ9Y6R7 5405 aaPredicted RBP2.32□□□□□ -2.04
DSG3-201ENST00000257189 KRTAP4-3Q9BYR4 195 aa2.3□□□□□ -2.04
DSG3-201ENST00000257189 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
DSG3-201ENST00000257189 KRTAP5-9P26371 169 aa2.21□□□□□ -2.06
DSG3-201ENST00000257189 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.06
DSG3-201ENST00000257189 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
DSG3-201ENST00000257189 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
DSG3-201ENST00000257189 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
DSG3-201ENST00000257189 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
DSG3-201ENST00000257189 KRTAP9-4Q9BYQ2 154 aa2.14□□□□□ -2.07
DSG3-201ENST00000257189 KRTAP9-6A8MVA2 160 aa2.13□□□□□ -2.07
DSG3-201ENST00000257189 KRTAP6-1Q3LI64 71 aa2.06□□□□□ -2.08
DSG3-201ENST00000257189 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
DSG3-201ENST00000257189 KRTAP4-6Q9BYQ5 205 aa1.99□□□□□ -2.09
DSG3-201ENST00000257189 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
DSG3-201ENST00000257189 KRTAP5-4Q6L8H1 288 aa1.97□□□□□ -2.09
DSG3-201ENST00000257189 KRTAP5-3Q6L8H2 238 aa1.97□□□□□ -2.09
DSG3-201ENST00000257189 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
DSG3-201ENST00000257189 KRTAP4-11Q9BYQ6 195 aa1.92□□□□□ -2.1
DSG3-201ENST00000257189 KRTAP4-12Q9BQ66 201 aa1.91□□□□□ -2.1
DSG3-201ENST00000257189 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
DSG3-201ENST00000257189 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
DSG3-201ENST00000257189 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
DSG3-201ENST00000257189 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
DSG3-201ENST00000257189 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
DSG3-201ENST00000257189 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
DSG3-201ENST00000257189 MUC5ACP98088 5654 aa1.65□□□□□ -2.14
DSG3-201ENST00000257189 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
DSG3-201ENST00000257189 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
DSG3-201ENST00000257189 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.16
DSG3-201ENST00000257189 KRTAP5-2Q701N4 177 aa1.36□□□□□ -2.19
DSG3-201ENST00000257189 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
DSG3-201ENST00000257189 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.31□□□□□ -2.2
DSG3-201ENST00000257189 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
DSG3-201ENST00000257189 KRTAP5-1Q6L8H4 278 aa1.18□□□□□ -2.22
DSG3-201ENST00000257189 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
DSG3-201ENST00000257189 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 100.6 ms