RNA–Protein interactions for RNA: ENST00000250113.11

FXR2-201, Transcript of FMR1 autosomal homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXR2, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-201ENST00000250113 KRTAP4-3Q9BYR4 195 aa6.63□□□□□ -1.35
FXR2-201ENST00000250113 MACF1Q9UPN3 7388 aaKnown RBP6.63□□□□□ -1.35
FXR2-201ENST00000250113 LOC100996750A0A140TA64 210 aa6.58□□□□□ -1.36
FXR2-201ENST00000250113 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
FXR2-201ENST00000250113 SPRR2FQ96RM1 72 aa6.51□□□□□ -1.37
FXR2-201ENST00000250113 SYNE2Q8WXH0 6885 aaKnown RBP6.5□□□□□ -1.37
FXR2-201ENST00000250113 KRTAP19-3Q7Z4W3 81 aa6.48□□□□□ -1.37
FXR2-201ENST00000250113 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
FXR2-201ENST00000250113 KRTAP9-2Q9BYQ4 174 aa6.46□□□□□ -1.37
FXR2-201ENST00000250113 MT1GP13640 62 aa6.45□□□□□ -1.38
FXR2-201ENST00000250113 MT1MQ8N339 61 aa6.45□□□□□ -1.38
FXR2-201ENST00000250113 KRTAP2-3P0C7H8 128 aa6.37□□□□□ -1.39
FXR2-201ENST00000250113 KRTAP2-4Q9BYR9 128 aa6.37□□□□□ -1.39
FXR2-201ENST00000250113 KRTAP2-1Q9BYU5 128 aa6.37□□□□□ -1.39
FXR2-201ENST00000250113 MDN1Q9NU22 5596 aa6.34□□□□□ -1.39
FXR2-201ENST00000250113 LCE5AQ5TCM9 118 aa6.3□□□□□ -1.4
FXR2-201ENST00000250113 SYNE1Q8NF91 8797 aaKnown RBP6.27□□□□□ -1.41
FXR2-201ENST00000250113 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
FXR2-201ENST00000250113 OBSCNQ5VST9 7968 aa6.04□□□□□ -1.44
FXR2-201ENST00000250113 KRTAP5-9P26371 169 aa6.02□□□□□ -1.45
FXR2-201ENST00000250113 SPRR2EP22531 72 aa5.98□□□□□ -1.45
FXR2-201ENST00000250113 SPRR2BP35325 72 aa5.98□□□□□ -1.45
FXR2-201ENST00000250113 SPRR2AP35326 72 aa5.98□□□□□ -1.45
FXR2-201ENST00000250113 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
FXR2-201ENST00000250113 LCE3BQ5TA77 95 aa5.96□□□□□ -1.46
FXR2-201ENST00000250113 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
FXR2-201ENST00000250113 KRTAP6-1Q3LI64 71 aa5.83□□□□□ -1.48
FXR2-201ENST00000250113 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.78□□□□□ -1.48
FXR2-201ENST00000250113 SPRR2DP22532 72 aa5.72□□□□□ -1.49
FXR2-201ENST00000250113 MT1AP04731 61 aa5.7□□□□□ -1.5
FXR2-201ENST00000250113 KRTAP5-5Q701N2 237 aaPredicted RBP5.68□□□□□ -1.5
FXR2-201ENST00000250113 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
FXR2-201ENST00000250113 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
FXR2-201ENST00000250113 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
FXR2-201ENST00000250113 LCE3DQ9BYE3 92 aa5.4□□□□□ -1.54
FXR2-201ENST00000250113 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
FXR2-201ENST00000250113 NEBP20929 6669 aa5.35□□□□□ -1.55
FXR2-201ENST00000250113 KRTAP6-2Q3LI66 62 aa5.3□□□□□ -1.56
FXR2-201ENST00000250113 LCE3EQ5T5B0 92 aa5.28□□□□□ -1.56
FXR2-201ENST00000250113 PRM1P04553 51 aa5.2□□□□□ -1.58
FXR2-201ENST00000250113 MT3P25713 68 aa5.15□□□□□ -1.59
FXR2-201ENST00000250113 MT4P47944 62 aa5.13□□□□□ -1.59
FXR2-201ENST00000250113 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
FXR2-201ENST00000250113 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
FXR2-201ENST00000250113 HMCN1Q96RW7 5635 aa4.92□□□□□ -1.62
FXR2-201ENST00000250113 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
FXR2-201ENST00000250113 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
FXR2-201ENST00000250113 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
FXR2-201ENST00000250113 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
FXR2-201ENST00000250113 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
FXR2-201ENST00000250113 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
FXR2-201ENST00000250113 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
FXR2-201ENST00000250113 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
FXR2-201ENST00000250113 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.72
FXR2-201ENST00000250113 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
FXR2-201ENST00000250113 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
FXR2-201ENST00000250113 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
FXR2-201ENST00000250113 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
FXR2-201ENST00000250113 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
FXR2-201ENST00000250113 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
FXR2-201ENST00000250113 LCE1CQ5T751 118 aa4□□□□□ -1.77
FXR2-201ENST00000250113 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
FXR2-201ENST00000250113 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
FXR2-201ENST00000250113 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
FXR2-201ENST00000250113 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
FXR2-201ENST00000250113 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
FXR2-201ENST00000250113 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
FXR2-201ENST00000250113 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
FXR2-201ENST00000250113 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
FXR2-201ENST00000250113 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
FXR2-201ENST00000250113 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
FXR2-201ENST00000250113 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
FXR2-201ENST00000250113 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
FXR2-201ENST00000250113 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
FXR2-201ENST00000250113 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
FXR2-201ENST00000250113 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
FXR2-201ENST00000250113 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 485.9 ms