RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
CDC42EP1-201ENST00000249014 FCGBPQ9Y6R7 5405 aaPredicted RBP6.58□□□□□ -1.36
CDC42EP1-201ENST00000249014 KRTAP2-3P0C7H8 128 aa6.55□□□□□ -1.36
CDC42EP1-201ENST00000249014 KRTAP2-4Q9BYR9 128 aa6.55□□□□□ -1.36
CDC42EP1-201ENST00000249014 KRTAP2-1Q9BYU5 128 aa6.55□□□□□ -1.36
CDC42EP1-201ENST00000249014 KRTAP4-3Q9BYR4 195 aa6.48□□□□□ -1.37
CDC42EP1-201ENST00000249014 MUC12Q9UKN1 5478 aa6.45□□□□□ -1.38
CDC42EP1-201ENST00000249014 KRTAP19-3Q7Z4W3 81 aa6.43□□□□□ -1.38
CDC42EP1-201ENST00000249014 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
CDC42EP1-201ENST00000249014 MT1MQ8N339 61 aa6.41□□□□□ -1.38
CDC42EP1-201ENST00000249014 MT1GP13640 62 aa6.38□□□□□ -1.39
CDC42EP1-201ENST00000249014 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
CDC42EP1-201ENST00000249014 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
CDC42EP1-201ENST00000249014 MACF1Q9UPN3 7388 aaKnown RBP6.24□□□□□ -1.41
CDC42EP1-201ENST00000249014 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
CDC42EP1-201ENST00000249014 DSTQ03001 7570 aaKnown RBP6.15□□□□□ -1.42
CDC42EP1-201ENST00000249014 SYNE2Q8WXH0 6885 aaKnown RBP6.05□□□□□ -1.44
CDC42EP1-201ENST00000249014 KRTAP9-7A8MTY7 169 aa5.98□□□□□ -1.45
CDC42EP1-201ENST00000249014 MDN1Q9NU22 5596 aa5.98□□□□□ -1.45
CDC42EP1-201ENST00000249014 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.46
CDC42EP1-201ENST00000249014 KRTAP5-9P26371 169 aa5.94□□□□□ -1.46
CDC42EP1-201ENST00000249014 LCE1AQ5T7P2 110 aa5.89□□□□□ -1.47
CDC42EP1-201ENST00000249014 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
CDC42EP1-201ENST00000249014 KRTAP6-1Q3LI64 71 aa5.8□□□□□ -1.48
CDC42EP1-201ENST00000249014 SPRR2EP22531 72 aa5.74□□□□□ -1.49
CDC42EP1-201ENST00000249014 SPRR2BP35325 72 aa5.74□□□□□ -1.49
CDC42EP1-201ENST00000249014 SPRR2AP35326 72 aa5.74□□□□□ -1.49
CDC42EP1-201ENST00000249014 KRTAP12-4P60329 112 aa5.74□□□□□ -1.49
CDC42EP1-201ENST00000249014 MT1AP04731 61 aa5.73□□□□□ -1.49
CDC42EP1-201ENST00000249014 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
CDC42EP1-201ENST00000249014 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
CDC42EP1-201ENST00000249014 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
CDC42EP1-201ENST00000249014 NEBP20929 6669 aa5.55□□□□□ -1.52
CDC42EP1-201ENST00000249014 SPRR2DP22532 72 aa5.53□□□□□ -1.52
CDC42EP1-201ENST00000249014 LCE3DQ9BYE3 92 aa5.44□□□□□ -1.54
CDC42EP1-201ENST00000249014 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
CDC42EP1-201ENST00000249014 LCE3EQ5T5B0 92 aa5.35□□□□□ -1.55
CDC42EP1-201ENST00000249014 KRTAP20-1Q3LI63 56 aa5.27□□□□□ -1.57
CDC42EP1-201ENST00000249014 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
CDC42EP1-201ENST00000249014 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.58
CDC42EP1-201ENST00000249014 MT3P25713 68 aa5.14□□□□□ -1.59
CDC42EP1-201ENST00000249014 KRTAP5-4Q6L8H1 288 aa5.08□□□□□ -1.6
CDC42EP1-201ENST00000249014 PRM1P04553 51 aa5.05□□□□□ -1.6
CDC42EP1-201ENST00000249014 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
CDC42EP1-201ENST00000249014 KRTAP4-6Q9BYQ5 205 aa4.91□□□□□ -1.62
CDC42EP1-201ENST00000249014 LCE4AQ5TA78 99 aa4.9□□□□□ -1.62
CDC42EP1-201ENST00000249014 MT4P47944 62 aa4.85□□□□□ -1.63
CDC42EP1-201ENST00000249014 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
CDC42EP1-201ENST00000249014 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
CDC42EP1-201ENST00000249014 KRTAP5-2Q701N4 177 aa4.73□□□□□ -1.65
CDC42EP1-201ENST00000249014 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
CDC42EP1-201ENST00000249014 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
CDC42EP1-201ENST00000249014 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
CDC42EP1-201ENST00000249014 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
CDC42EP1-201ENST00000249014 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
CDC42EP1-201ENST00000249014 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
CDC42EP1-201ENST00000249014 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
CDC42EP1-201ENST00000249014 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
CDC42EP1-201ENST00000249014 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
CDC42EP1-201ENST00000249014 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
CDC42EP1-201ENST00000249014 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
CDC42EP1-201ENST00000249014 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
CDC42EP1-201ENST00000249014 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
CDC42EP1-201ENST00000249014 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
CDC42EP1-201ENST00000249014 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
CDC42EP1-201ENST00000249014 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
CDC42EP1-201ENST00000249014 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
CDC42EP1-201ENST00000249014 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
CDC42EP1-201ENST00000249014 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.85
CDC42EP1-201ENST00000249014 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
CDC42EP1-201ENST00000249014 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
CDC42EP1-201ENST00000249014 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
CDC42EP1-201ENST00000249014 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
CDC42EP1-201ENST00000249014 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
CDC42EP1-201ENST00000249014 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
CDC42EP1-201ENST00000249014 PHGR1C9JFL3 82 aa3□□□□□ -1.93
CDC42EP1-201ENST00000249014 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms