RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
PTPN12-201ENST00000248594 LCE2DQ5TA82 110 aaPredicted RBP6.2□□□□□ -1.42
PTPN12-201ENST00000248594 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
PTPN12-201ENST00000248594 KRTAP9-2Q9BYQ4 174 aa6.1□□□□□ -1.43
PTPN12-201ENST00000248594 SSPOA2VEC9 5147 aa6.09□□□□□ -1.43
PTPN12-201ENST00000248594 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
PTPN12-201ENST00000248594 KRTAP19-7Q3SYF9 63 aa6.03□□□□□ -1.44
PTPN12-201ENST00000248594 MT1GP13640 62 aa5.96□□□□□ -1.46
PTPN12-201ENST00000248594 KRTAP19-6Q3LI70 58 aa5.95□□□□□ -1.46
PTPN12-201ENST00000248594 SYNE2Q8WXH0 6885 aaKnown RBP5.94□□□□□ -1.46
PTPN12-201ENST00000248594 MT1LQ93083 61 aa5.94□□□□□ -1.46
PTPN12-201ENST00000248594 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
PTPN12-201ENST00000248594 MT1EP04732 61 aa5.8□□□□□ -1.48
PTPN12-201ENST00000248594 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
PTPN12-201ENST00000248594 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
PTPN12-201ENST00000248594 KRTAP9-7A8MTY7 169 aa5.62□□□□□ -1.51
PTPN12-201ENST00000248594 PRM1P04553 51 aa5.61□□□□□ -1.51
PTPN12-201ENST00000248594 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
PTPN12-201ENST00000248594 MDN1Q9NU22 5596 aa5.55□□□□□ -1.52
PTPN12-201ENST00000248594 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
PTPN12-201ENST00000248594 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
PTPN12-201ENST00000248594 KRTAP6-3Q3LI67 103 aa5.44□□□□□ -1.54
PTPN12-201ENST00000248594 MT1MQ8N339 61 aa5.42□□□□□ -1.54
PTPN12-201ENST00000248594 LCE3DQ9BYE3 92 aa5.41□□□□□ -1.54
PTPN12-201ENST00000248594 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.4□□□□□ -1.54
PTPN12-201ENST00000248594 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.55
PTPN12-201ENST00000248594 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
PTPN12-201ENST00000248594 LCE3EQ5T5B0 92 aa5.35□□□□□ -1.55
PTPN12-201ENST00000248594 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
PTPN12-201ENST00000248594 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
PTPN12-201ENST00000248594 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
PTPN12-201ENST00000248594 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
PTPN12-201ENST00000248594 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
PTPN12-201ENST00000248594 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
PTPN12-201ENST00000248594 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
PTPN12-201ENST00000248594 SPRR2EP22531 72 aa5.05□□□□□ -1.6
PTPN12-201ENST00000248594 SPRR2BP35325 72 aa5.05□□□□□ -1.6
PTPN12-201ENST00000248594 SPRR2AP35326 72 aa5.05□□□□□ -1.6
PTPN12-201ENST00000248594 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
PTPN12-201ENST00000248594 MT1AP04731 61 aa5.04□□□□□ -1.6
PTPN12-201ENST00000248594 NEBP20929 6669 aa4.91□□□□□ -1.62
PTPN12-201ENST00000248594 SPRR2DP22532 72 aa4.86□□□□□ -1.63
PTPN12-201ENST00000248594 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
PTPN12-201ENST00000248594 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.67
PTPN12-201ENST00000248594 MUC19Q7Z5P9 8384 aa4.56□□□□□ -1.68
PTPN12-201ENST00000248594 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
PTPN12-201ENST00000248594 MT3P25713 68 aa4.43□□□□□ -1.7
PTPN12-201ENST00000248594 MT4P47944 62 aa4.37□□□□□ -1.71
PTPN12-201ENST00000248594 KRTAP5-4Q6L8H1 288 aa4.36□□□□□ -1.71
PTPN12-201ENST00000248594 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
PTPN12-201ENST00000248594 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
PTPN12-201ENST00000248594 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
PTPN12-201ENST00000248594 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
PTPN12-201ENST00000248594 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
PTPN12-201ENST00000248594 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
PTPN12-201ENST00000248594 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
PTPN12-201ENST00000248594 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
PTPN12-201ENST00000248594 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
PTPN12-201ENST00000248594 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
PTPN12-201ENST00000248594 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
PTPN12-201ENST00000248594 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
PTPN12-201ENST00000248594 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
PTPN12-201ENST00000248594 LCE1CQ5T751 118 aa3.53□□□□□ -1.85
PTPN12-201ENST00000248594 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
PTPN12-201ENST00000248594 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
PTPN12-201ENST00000248594 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
PTPN12-201ENST00000248594 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
PTPN12-201ENST00000248594 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
PTPN12-201ENST00000248594 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
PTPN12-201ENST00000248594 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
PTPN12-201ENST00000248594 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.91
PTPN12-201ENST00000248594 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
PTPN12-201ENST00000248594 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
PTPN12-201ENST00000248594 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
PTPN12-201ENST00000248594 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
PTPN12-201ENST00000248594 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
PTPN12-201ENST00000248594 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms