RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
NR1D1-201ENST00000246672 KRTAP9-2Q9BYQ4 174 aa4.02□□□□□ -1.77
NR1D1-201ENST00000246672 LCE2DQ5TA82 110 aaPredicted RBP4.02□□□□□ -1.77
NR1D1-201ENST00000246672 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
NR1D1-201ENST00000246672 MT1GP13640 62 aa3.97□□□□□ -1.77
NR1D1-201ENST00000246672 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.77
NR1D1-201ENST00000246672 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
NR1D1-201ENST00000246672 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
NR1D1-201ENST00000246672 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
NR1D1-201ENST00000246672 KRTAP9-6A0A140TA67 174 aa3.91□□□□□ -1.78
NR1D1-201ENST00000246672 MT1MQ8N339 61 aa3.84□□□□□ -1.8
NR1D1-201ENST00000246672 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
NR1D1-201ENST00000246672 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
NR1D1-201ENST00000246672 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
NR1D1-201ENST00000246672 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
NR1D1-201ENST00000246672 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
NR1D1-201ENST00000246672 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
NR1D1-201ENST00000246672 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
NR1D1-201ENST00000246672 KRTAP9-7A8MTY7 169 aa3.67□□□□□ -1.82
NR1D1-201ENST00000246672 PRM1P04553 51 aa3.64□□□□□ -1.83
NR1D1-201ENST00000246672 MT1AP04731 61 aa3.63□□□□□ -1.83
NR1D1-201ENST00000246672 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
NR1D1-201ENST00000246672 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
NR1D1-201ENST00000246672 LCE5AQ5TCM9 118 aa3.62□□□□□ -1.83
NR1D1-201ENST00000246672 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
NR1D1-201ENST00000246672 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
NR1D1-201ENST00000246672 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
NR1D1-201ENST00000246672 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
NR1D1-201ENST00000246672 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
NR1D1-201ENST00000246672 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
NR1D1-201ENST00000246672 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
NR1D1-201ENST00000246672 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
NR1D1-201ENST00000246672 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
NR1D1-201ENST00000246672 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
NR1D1-201ENST00000246672 SPRR2EP22531 72 aa3.25□□□□□ -1.89
NR1D1-201ENST00000246672 SPRR2BP35325 72 aa3.25□□□□□ -1.89
NR1D1-201ENST00000246672 SPRR2AP35326 72 aa3.25□□□□□ -1.89
NR1D1-201ENST00000246672 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
NR1D1-201ENST00000246672 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
NR1D1-201ENST00000246672 NEBP20929 6669 aa3.18□□□□□ -1.9
NR1D1-201ENST00000246672 MT3P25713 68 aa3.1□□□□□ -1.91
NR1D1-201ENST00000246672 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
NR1D1-201ENST00000246672 SPRR2DP22532 72 aa3.09□□□□□ -1.91
NR1D1-201ENST00000246672 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
NR1D1-201ENST00000246672 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
NR1D1-201ENST00000246672 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
NR1D1-201ENST00000246672 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
NR1D1-201ENST00000246672 MT4P47944 62 aa2.86□□□□□ -1.95
NR1D1-201ENST00000246672 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
NR1D1-201ENST00000246672 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
NR1D1-201ENST00000246672 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
NR1D1-201ENST00000246672 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
NR1D1-201ENST00000246672 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
NR1D1-201ENST00000246672 MUC5ACP98088 5654 aa2.71□□□□□ -1.97
NR1D1-201ENST00000246672 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
NR1D1-201ENST00000246672 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
NR1D1-201ENST00000246672 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
NR1D1-201ENST00000246672 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
NR1D1-201ENST00000246672 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
NR1D1-201ENST00000246672 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -2
NR1D1-201ENST00000246672 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
NR1D1-201ENST00000246672 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
NR1D1-201ENST00000246672 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
NR1D1-201ENST00000246672 KRTAP5-3Q6L8H2 238 aa2.46□□□□□ -2.02
NR1D1-201ENST00000246672 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
NR1D1-201ENST00000246672 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.03
NR1D1-201ENST00000246672 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
NR1D1-201ENST00000246672 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
NR1D1-201ENST00000246672 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
NR1D1-201ENST00000246672 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
NR1D1-201ENST00000246672 KRTAP4-12Q9BQ66 201 aa2.23□□□□□ -2.05
NR1D1-201ENST00000246672 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
NR1D1-201ENST00000246672 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
NR1D1-201ENST00000246672 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
NR1D1-201ENST00000246672 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
NR1D1-201ENST00000246672 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
NR1D1-201ENST00000246672 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 112.6 ms