RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
NCLN-201ENST00000246117 LCE3BQ5TA77 95 aa4.63□□□□□ -1.67
NCLN-201ENST00000246117 MT1LQ93083 61 aa4.6□□□□□ -1.67
NCLN-201ENST00000246117 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
NCLN-201ENST00000246117 MT1EP04732 61 aa4.57□□□□□ -1.68
NCLN-201ENST00000246117 LCE2AQ5TA79 106 aaPredicted RBP4.57□□□□□ -1.68
NCLN-201ENST00000246117 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
NCLN-201ENST00000246117 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
NCLN-201ENST00000246117 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
NCLN-201ENST00000246117 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.7
NCLN-201ENST00000246117 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
NCLN-201ENST00000246117 MT1MQ8N339 61 aa4.35□□□□□ -1.71
NCLN-201ENST00000246117 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
NCLN-201ENST00000246117 SPRR2EP22531 72 aa4.33□□□□□ -1.72
NCLN-201ENST00000246117 SPRR2BP35325 72 aa4.33□□□□□ -1.72
NCLN-201ENST00000246117 SPRR2AP35326 72 aa4.33□□□□□ -1.72
NCLN-201ENST00000246117 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
NCLN-201ENST00000246117 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
NCLN-201ENST00000246117 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
NCLN-201ENST00000246117 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
NCLN-201ENST00000246117 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
NCLN-201ENST00000246117 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
NCLN-201ENST00000246117 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
NCLN-201ENST00000246117 SPRR2DP22532 72 aa4.12□□□□□ -1.75
NCLN-201ENST00000246117 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
NCLN-201ENST00000246117 KRTAP9-6A0A140TA67 174 aa4.07□□□□□ -1.76
NCLN-201ENST00000246117 MDN1Q9NU22 5596 aa4.04□□□□□ -1.76
NCLN-201ENST00000246117 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
NCLN-201ENST00000246117 PRM1P04553 51 aa3.97□□□□□ -1.77
NCLN-201ENST00000246117 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
NCLN-201ENST00000246117 MT4P47944 62 aa3.89□□□□□ -1.79
NCLN-201ENST00000246117 MT1AP04731 61 aa3.86□□□□□ -1.79
NCLN-201ENST00000246117 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.79
NCLN-201ENST00000246117 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.8
NCLN-201ENST00000246117 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
NCLN-201ENST00000246117 MT3P25713 68 aa3.76□□□□□ -1.81
NCLN-201ENST00000246117 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
NCLN-201ENST00000246117 MUC19Q7Z5P9 8384 aa3.66□□□□□ -1.82
NCLN-201ENST00000246117 LCE1DQ5T752 114 aa3.65□□□□□ -1.83
NCLN-201ENST00000246117 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
NCLN-201ENST00000246117 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
NCLN-201ENST00000246117 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
NCLN-201ENST00000246117 NEBP20929 6669 aa3.49□□□□□ -1.85
NCLN-201ENST00000246117 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
NCLN-201ENST00000246117 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
NCLN-201ENST00000246117 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.87
NCLN-201ENST00000246117 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
NCLN-201ENST00000246117 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
NCLN-201ENST00000246117 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
NCLN-201ENST00000246117 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
NCLN-201ENST00000246117 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
NCLN-201ENST00000246117 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
NCLN-201ENST00000246117 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
NCLN-201ENST00000246117 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
NCLN-201ENST00000246117 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
NCLN-201ENST00000246117 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
NCLN-201ENST00000246117 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
NCLN-201ENST00000246117 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
NCLN-201ENST00000246117 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
NCLN-201ENST00000246117 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
NCLN-201ENST00000246117 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
NCLN-201ENST00000246117 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
NCLN-201ENST00000246117 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
NCLN-201ENST00000246117 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
NCLN-201ENST00000246117 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
NCLN-201ENST00000246117 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
NCLN-201ENST00000246117 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
NCLN-201ENST00000246117 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
NCLN-201ENST00000246117 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
NCLN-201ENST00000246117 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
NCLN-201ENST00000246117 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
NCLN-201ENST00000246117 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
NCLN-201ENST00000246117 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
NCLN-201ENST00000246117 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
NCLN-201ENST00000246117 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
NCLN-201ENST00000246117 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
NCLN-201ENST00000246117 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms