RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
SOX9-201ENST00000245479 MT1GP13640 62 aa3.97□□□□□ -1.77
SOX9-201ENST00000245479 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
SOX9-201ENST00000245479 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
SOX9-201ENST00000245479 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
SOX9-201ENST00000245479 LCE2DQ5TA82 110 aaPredicted RBP3.93□□□□□ -1.78
SOX9-201ENST00000245479 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
SOX9-201ENST00000245479 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
SOX9-201ENST00000245479 MT1LQ93083 61 aa3.85□□□□□ -1.79
SOX9-201ENST00000245479 MT1EP04732 61 aa3.84□□□□□ -1.8
SOX9-201ENST00000245479 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
SOX9-201ENST00000245479 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
SOX9-201ENST00000245479 KRTAP9-6A0A140TA67 174 aa3.79□□□□□ -1.8
SOX9-201ENST00000245479 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
SOX9-201ENST00000245479 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
SOX9-201ENST00000245479 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
SOX9-201ENST00000245479 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
SOX9-201ENST00000245479 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.82
SOX9-201ENST00000245479 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
SOX9-201ENST00000245479 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
SOX9-201ENST00000245479 MT1MQ8N339 61 aa3.64□□□□□ -1.83
SOX9-201ENST00000245479 SPRR2EP22531 72 aa3.59□□□□□ -1.84
SOX9-201ENST00000245479 SPRR2BP35325 72 aa3.59□□□□□ -1.84
SOX9-201ENST00000245479 SPRR2AP35326 72 aa3.59□□□□□ -1.84
SOX9-201ENST00000245479 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
SOX9-201ENST00000245479 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
SOX9-201ENST00000245479 KRTAP9-7A8MTY7 169 aa3.52□□□□□ -1.85
SOX9-201ENST00000245479 PRM1P04553 51 aa3.49□□□□□ -1.85
SOX9-201ENST00000245479 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.86
SOX9-201ENST00000245479 SPRR2DP22532 72 aa3.45□□□□□ -1.86
SOX9-201ENST00000245479 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
SOX9-201ENST00000245479 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
SOX9-201ENST00000245479 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
SOX9-201ENST00000245479 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.87
SOX9-201ENST00000245479 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
SOX9-201ENST00000245479 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
SOX9-201ENST00000245479 MT4P47944 62 aa3.24□□□□□ -1.89
SOX9-201ENST00000245479 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
SOX9-201ENST00000245479 MT1AP04731 61 aa3.18□□□□□ -1.9
SOX9-201ENST00000245479 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
SOX9-201ENST00000245479 MT3P25713 68 aa3.09□□□□□ -1.92
SOX9-201ENST00000245479 NEBP20929 6669 aa3.07□□□□□ -1.92
SOX9-201ENST00000245479 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
SOX9-201ENST00000245479 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
SOX9-201ENST00000245479 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
SOX9-201ENST00000245479 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
SOX9-201ENST00000245479 LCE1DQ5T752 114 aa2.96□□□□□ -1.94
SOX9-201ENST00000245479 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
SOX9-201ENST00000245479 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
SOX9-201ENST00000245479 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
SOX9-201ENST00000245479 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
SOX9-201ENST00000245479 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
SOX9-201ENST00000245479 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
SOX9-201ENST00000245479 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
SOX9-201ENST00000245479 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
SOX9-201ENST00000245479 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
SOX9-201ENST00000245479 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
SOX9-201ENST00000245479 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
SOX9-201ENST00000245479 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2
SOX9-201ENST00000245479 LCE1FQ5T754 118 aa2.53□□□□□ -2
SOX9-201ENST00000245479 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
SOX9-201ENST00000245479 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
SOX9-201ENST00000245479 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
SOX9-201ENST00000245479 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
SOX9-201ENST00000245479 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
SOX9-201ENST00000245479 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
SOX9-201ENST00000245479 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
SOX9-201ENST00000245479 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
SOX9-201ENST00000245479 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
SOX9-201ENST00000245479 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
SOX9-201ENST00000245479 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
SOX9-201ENST00000245479 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
SOX9-201ENST00000245479 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
SOX9-201ENST00000245479 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
SOX9-201ENST00000245479 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
SOX9-201ENST00000245479 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
SOX9-201ENST00000245479 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 20 ms