RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 KRTAP19-7Q3SYF9 63 aa3.12□□□□□ -1.91
SRSF6-201ENST00000244020 LOC100996750A0A140TA64 210 aa3.1□□□□□ -1.91
SRSF6-201ENST00000244020 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
SRSF6-201ENST00000244020 MT1LQ93083 61 aa3.08□□□□□ -1.92
SRSF6-201ENST00000244020 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
SRSF6-201ENST00000244020 MT1GP13640 62 aa3.05□□□□□ -1.92
SRSF6-201ENST00000244020 MT1EP04732 61 aa3.04□□□□□ -1.92
SRSF6-201ENST00000244020 SSPOA2VEC9 5147 aa3.04□□□□□ -1.92
SRSF6-201ENST00000244020 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
SRSF6-201ENST00000244020 SPRR2FQ96RM1 72 aa2.98□□□□□ -1.93
SRSF6-201ENST00000244020 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
SRSF6-201ENST00000244020 DSTQ03001 7570 aaKnown RBP2.96□□□□□ -1.94
SRSF6-201ENST00000244020 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
SRSF6-201ENST00000244020 PRM1P04553 51 aa2.94□□□□□ -1.94
SRSF6-201ENST00000244020 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
SRSF6-201ENST00000244020 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
SRSF6-201ENST00000244020 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
SRSF6-201ENST00000244020 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
SRSF6-201ENST00000244020 MACF1Q9UPN3 7388 aaKnown RBP2.84□□□□□ -1.95
SRSF6-201ENST00000244020 MT1MQ8N339 61 aa2.84□□□□□ -1.95
SRSF6-201ENST00000244020 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
SRSF6-201ENST00000244020 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
SRSF6-201ENST00000244020 KRTAP9-2Q9BYQ4 174 aa2.79□□□□□ -1.96
SRSF6-201ENST00000244020 KRTAP19-6Q3LI70 58 aa2.76□□□□□ -1.97
SRSF6-201ENST00000244020 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
SRSF6-201ENST00000244020 KRTAP9-7A8MTY7 169 aa2.66□□□□□ -1.98
SRSF6-201ENST00000244020 MT1AP04731 61 aa2.66□□□□□ -1.98
SRSF6-201ENST00000244020 LCE5AQ5TCM9 118 aa2.64□□□□□ -1.99
SRSF6-201ENST00000244020 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
SRSF6-201ENST00000244020 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.61□□□□□ -1.99
SRSF6-201ENST00000244020 SPRR2EP22531 72 aa2.6□□□□□ -1.99
SRSF6-201ENST00000244020 SPRR2BP35325 72 aa2.6□□□□□ -1.99
SRSF6-201ENST00000244020 SPRR2AP35326 72 aa2.6□□□□□ -1.99
SRSF6-201ENST00000244020 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
SRSF6-201ENST00000244020 KRTAP9-6A0A140TA67 174 aa2.52□□□□□ -2.01
SRSF6-201ENST00000244020 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
SRSF6-201ENST00000244020 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
SRSF6-201ENST00000244020 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
SRSF6-201ENST00000244020 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
SRSF6-201ENST00000244020 KRTAP9-4Q9BYQ2 154 aa2.5□□□□□ -2.01
SRSF6-201ENST00000244020 MT3P25713 68 aa2.49□□□□□ -2.01
SRSF6-201ENST00000244020 SPRR2DP22532 72 aa2.48□□□□□ -2.01
SRSF6-201ENST00000244020 LCE4AQ5TA78 99 aa2.48□□□□□ -2.01
SRSF6-201ENST00000244020 LCE1DQ5T752 114 aa2.47□□□□□ -2.01
SRSF6-201ENST00000244020 LCE1AQ5T7P2 110 aa2.45□□□□□ -2.02
SRSF6-201ENST00000244020 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
SRSF6-201ENST00000244020 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
SRSF6-201ENST00000244020 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
SRSF6-201ENST00000244020 MT4P47944 62 aa2.36□□□□□ -2.03
SRSF6-201ENST00000244020 KRTAP2-2Q9BYT5 123 aa2.36□□□□□ -2.03
SRSF6-201ENST00000244020 KRTAP5-9P26371 169 aa2.33□□□□□ -2.04
SRSF6-201ENST00000244020 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
SRSF6-201ENST00000244020 NEBP20929 6669 aa2.23□□□□□ -2.05
SRSF6-201ENST00000244020 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
SRSF6-201ENST00000244020 KRTAP20-1Q3LI63 56 aa2.2□□□□□ -2.06
SRSF6-201ENST00000244020 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
SRSF6-201ENST00000244020 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
SRSF6-201ENST00000244020 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
SRSF6-201ENST00000244020 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.1
SRSF6-201ENST00000244020 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
SRSF6-201ENST00000244020 MUC5ACP98088 5654 aa1.96□□□□□ -2.1
SRSF6-201ENST00000244020 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
SRSF6-201ENST00000244020 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
SRSF6-201ENST00000244020 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
SRSF6-201ENST00000244020 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
SRSF6-201ENST00000244020 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
SRSF6-201ENST00000244020 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
SRSF6-201ENST00000244020 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
SRSF6-201ENST00000244020 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
SRSF6-201ENST00000244020 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
SRSF6-201ENST00000244020 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
SRSF6-201ENST00000244020 KRTAP5-8O75690 187 aa1.59□□□□□ -2.16
SRSF6-201ENST00000244020 KRTAP5-11Q6L8G4 156 aa1.51□□□□□ -2.17
SRSF6-201ENST00000244020 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
SRSF6-201ENST00000244020 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.2
SRSF6-201ENST00000244020 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
SRSF6-201ENST00000244020 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms