RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
CXCR4-201ENST00000241393 MT1HP80294 61 aa3.32□□□□□ -1.88
CXCR4-201ENST00000241393 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
CXCR4-201ENST00000241393 M0R2T5 61 aa3.3□□□□□ -1.88
CXCR4-201ENST00000241393 MT2AP02795 61 aa3.27□□□□□ -1.89
CXCR4-201ENST00000241393 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
CXCR4-201ENST00000241393 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
CXCR4-201ENST00000241393 MT1FP04733 61 aa3.24□□□□□ -1.89
CXCR4-201ENST00000241393 KRTAP10-10P60014 251 aa3.24□□□□□ -1.89
CXCR4-201ENST00000241393 KRTAP19-8Q3LI54 63 aa3.24□□□□□ -1.89
CXCR4-201ENST00000241393 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
CXCR4-201ENST00000241393 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
CXCR4-201ENST00000241393 FAT4Q6V0I7 4981 aa3.2□□□□□ -1.9
CXCR4-201ENST00000241393 MT1BP07438 61 aa3.15□□□□□ -1.9
CXCR4-201ENST00000241393 KRTAP8-1Q8IUC2 63 aa3.13□□□□□ -1.91
CXCR4-201ENST00000241393 MT1XP80297 61 aa3.11□□□□□ -1.91
CXCR4-201ENST00000241393 PRO2289Q9P1D8 64 aa3.07□□□□□ -1.92
CXCR4-201ENST00000241393 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
CXCR4-201ENST00000241393 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
CXCR4-201ENST00000241393 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
CXCR4-201ENST00000241393 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
CXCR4-201ENST00000241393 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
CXCR4-201ENST00000241393 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
CXCR4-201ENST00000241393 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
CXCR4-201ENST00000241393 KRTAP19-5Q3LI72 72 aa2.87□□□□□ -1.95
CXCR4-201ENST00000241393 INE1O15225 51 aa2.8□□□□□ -1.96
CXCR4-201ENST00000241393 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
CXCR4-201ENST00000241393 USH2AO75445 5202 aa2.77□□□□□ -1.97
CXCR4-201ENST00000241393 KRTAP19-6Q3LI70 58 aa2.74□□□□□ -1.97
CXCR4-201ENST00000241393 MT1EP04732 61 aa2.72□□□□□ -1.97
CXCR4-201ENST00000241393 FSIP2Q5CZC0 6907 aa2.72□□□□□ -1.97
CXCR4-201ENST00000241393 MT1LQ93083 61 aa2.71□□□□□ -1.98
CXCR4-201ENST00000241393 SSPOA2VEC9 5147 aa2.67□□□□□ -1.98
CXCR4-201ENST00000241393 CRCT1Q9UGL9 99 aa2.66□□□□□ -1.98
CXCR4-201ENST00000241393 KMT2DO14686 5537 aa2.66□□□□□ -1.98
CXCR4-201ENST00000241393 KRTAP2-3P0C7H8 128 aa2.65□□□□□ -1.99
CXCR4-201ENST00000241393 KRTAP2-4Q9BYR9 128 aa2.65□□□□□ -1.99
CXCR4-201ENST00000241393 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
CXCR4-201ENST00000241393 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
CXCR4-201ENST00000241393 MT1GP13640 62 aa2.57□□□□□ -2
CXCR4-201ENST00000241393 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
CXCR4-201ENST00000241393 MT1MQ8N339 61 aa2.53□□□□□ -2
CXCR4-201ENST00000241393 KRTAP5-8O75690 187 aa2.53□□□□□ -2
CXCR4-201ENST00000241393 FCGBPQ9Y6R7 5405 aaPredicted RBP2.52□□□□□ -2.01
CXCR4-201ENST00000241393 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
CXCR4-201ENST00000241393 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
CXCR4-201ENST00000241393 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
CXCR4-201ENST00000241393 SYNE2Q8WXH0 6885 aaKnown RBP2.44□□□□□ -2.02
CXCR4-201ENST00000241393 MUC12Q9UKN1 5478 aa2.39□□□□□ -2.03
CXCR4-201ENST00000241393 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
CXCR4-201ENST00000241393 MT1AP04731 61 aa2.31□□□□□ -2.04
CXCR4-201ENST00000241393 MDN1Q9NU22 5596 aa2.29□□□□□ -2.04
CXCR4-201ENST00000241393 SPRR2EP22531 72 aa2.28□□□□□ -2.04
CXCR4-201ENST00000241393 SPRR2BP35325 72 aa2.28□□□□□ -2.04
CXCR4-201ENST00000241393 SPRR2AP35326 72 aa2.28□□□□□ -2.04
CXCR4-201ENST00000241393 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
CXCR4-201ENST00000241393 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
CXCR4-201ENST00000241393 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
CXCR4-201ENST00000241393 SPRR2DP22532 72 aa2.2□□□□□ -2.06
CXCR4-201ENST00000241393 KRTAP20-1Q3LI63 56 aa2.2□□□□□ -2.06
CXCR4-201ENST00000241393 NEBP20929 6669 aa2.16□□□□□ -2.06
CXCR4-201ENST00000241393 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
CXCR4-201ENST00000241393 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
CXCR4-201ENST00000241393 KRTAP6-2Q3LI66 62 aa2.03□□□□□ -2.08
CXCR4-201ENST00000241393 PRM1P04553 51 aa2□□□□□ -2.09
CXCR4-201ENST00000241393 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
CXCR4-201ENST00000241393 MT4P47944 62 aa1.9□□□□□ -2.11
CXCR4-201ENST00000241393 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
CXCR4-201ENST00000241393 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.11
CXCR4-201ENST00000241393 KRTAP5-10Q6L8G5 202 aa1.67□□□□□ -2.14
CXCR4-201ENST00000241393 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
CXCR4-201ENST00000241393 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
CXCR4-201ENST00000241393 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
CXCR4-201ENST00000241393 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
CXCR4-201ENST00000241393 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
CXCR4-201ENST00000241393 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
CXCR4-201ENST00000241393 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 68.3 ms