RNA–Protein interactions for RNA: ENST00000239906.9

FAM53C-201, Transcript of family with sequence similarity 53 member C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53C, Length 4,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53C-201ENST00000239906 SPRR2BP35325 72 aa3.77□□□□□ -1.81
FAM53C-201ENST00000239906 SPRR2AP35326 72 aa3.77□□□□□ -1.81
FAM53C-201ENST00000239906 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
FAM53C-201ENST00000239906 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
FAM53C-201ENST00000239906 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
FAM53C-201ENST00000239906 USH2AO75445 5202 aa3.74□□□□□ -1.81
FAM53C-201ENST00000239906 MT1LQ93083 61 aa3.72□□□□□ -1.81
FAM53C-201ENST00000239906 MT1EP04732 61 aa3.71□□□□□ -1.82
FAM53C-201ENST00000239906 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
FAM53C-201ENST00000239906 KRTAP19-6Q3LI70 58 aa3.69□□□□□ -1.82
FAM53C-201ENST00000239906 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
FAM53C-201ENST00000239906 KRTAP4-7Q9BYR0 210 aa3.69□□□□□ -1.82
FAM53C-201ENST00000239906 MACF1Q9UPN3 7388 aaKnown RBP3.67□□□□□ -1.82
FAM53C-201ENST00000239906 SPRR2DP22532 72 aa3.63□□□□□ -1.83
FAM53C-201ENST00000239906 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
FAM53C-201ENST00000239906 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
FAM53C-201ENST00000239906 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
FAM53C-201ENST00000239906 MT1MQ8N339 61 aa3.55□□□□□ -1.84
FAM53C-201ENST00000239906 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
FAM53C-201ENST00000239906 FCGBPQ9Y6R7 5405 aaPredicted RBP3.52□□□□□ -1.85
FAM53C-201ENST00000239906 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
FAM53C-201ENST00000239906 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
FAM53C-201ENST00000239906 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
FAM53C-201ENST00000239906 LOC100996750A0A140TA64 210 aa3.43□□□□□ -1.86
FAM53C-201ENST00000239906 NEBP20929 6669 aa3.43□□□□□ -1.86
FAM53C-201ENST00000239906 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
FAM53C-201ENST00000239906 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
FAM53C-201ENST00000239906 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
FAM53C-201ENST00000239906 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
FAM53C-201ENST00000239906 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
FAM53C-201ENST00000239906 MT3P25713 68 aa3.35□□□□□ -1.87
FAM53C-201ENST00000239906 MT4P47944 62 aa3.35□□□□□ -1.87
FAM53C-201ENST00000239906 MT1AP04731 61 aa3.32□□□□□ -1.88
FAM53C-201ENST00000239906 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
FAM53C-201ENST00000239906 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
FAM53C-201ENST00000239906 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
FAM53C-201ENST00000239906 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
FAM53C-201ENST00000239906 LCE5AQ5TCM9 118 aa3.23□□□□□ -1.89
FAM53C-201ENST00000239906 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
FAM53C-201ENST00000239906 PRM1P04553 51 aa3.2□□□□□ -1.9
FAM53C-201ENST00000239906 LCE1DQ5T752 114 aa3.09□□□□□ -1.91
FAM53C-201ENST00000239906 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.92
FAM53C-201ENST00000239906 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
FAM53C-201ENST00000239906 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
FAM53C-201ENST00000239906 KRTAP5-9P26371 169 aa2.98□□□□□ -1.93
FAM53C-201ENST00000239906 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
FAM53C-201ENST00000239906 LCE4AQ5TA78 99 aa2.98□□□□□ -1.93
FAM53C-201ENST00000239906 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
FAM53C-201ENST00000239906 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
FAM53C-201ENST00000239906 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
FAM53C-201ENST00000239906 KRTAP4-6Q9BYQ5 205 aa2.74□□□□□ -1.97
FAM53C-201ENST00000239906 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
FAM53C-201ENST00000239906 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
FAM53C-201ENST00000239906 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
FAM53C-201ENST00000239906 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
FAM53C-201ENST00000239906 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
FAM53C-201ENST00000239906 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
FAM53C-201ENST00000239906 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
FAM53C-201ENST00000239906 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
FAM53C-201ENST00000239906 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
FAM53C-201ENST00000239906 KRTAP4-11Q9BYQ6 195 aa2.4□□□□□ -2.02
FAM53C-201ENST00000239906 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
FAM53C-201ENST00000239906 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
FAM53C-201ENST00000239906 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
FAM53C-201ENST00000239906 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
FAM53C-201ENST00000239906 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
FAM53C-201ENST00000239906 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
FAM53C-201ENST00000239906 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
FAM53C-201ENST00000239906 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
FAM53C-201ENST00000239906 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
FAM53C-201ENST00000239906 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
FAM53C-201ENST00000239906 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
FAM53C-201ENST00000239906 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
FAM53C-201ENST00000239906 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
FAM53C-201ENST00000239906 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
FAM53C-201ENST00000239906 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
FAM53C-201ENST00000239906 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 254.2 ms