RNA–Protein interactions for RNA: ENST00000239367.6

LRP11-201, Transcript of LDL receptor related protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP11, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP11-201ENST00000239367 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
LRP11-201ENST00000239367 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
LRP11-201ENST00000239367 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
LRP11-201ENST00000239367 MT1EP04732 61 aa5.51□□□□□ -1.53
LRP11-201ENST00000239367 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
LRP11-201ENST00000239367 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
LRP11-201ENST00000239367 MT1GP13640 62 aa5.4□□□□□ -1.55
LRP11-201ENST00000239367 MUC12Q9UKN1 5478 aa5.36□□□□□ -1.55
LRP11-201ENST00000239367 SSPOA2VEC9 5147 aa5.33□□□□□ -1.56
LRP11-201ENST00000239367 KRTAP19-6Q3LI70 58 aa5.28□□□□□ -1.56
LRP11-201ENST00000239367 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
LRP11-201ENST00000239367 LCE3BQ5TA77 95 aa5.19□□□□□ -1.58
LRP11-201ENST00000239367 MT1MQ8N339 61 aa5.14□□□□□ -1.59
LRP11-201ENST00000239367 LCE2DQ5TA82 110 aaPredicted RBP5.13□□□□□ -1.59
LRP11-201ENST00000239367 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
LRP11-201ENST00000239367 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
LRP11-201ENST00000239367 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
LRP11-201ENST00000239367 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.63
LRP11-201ENST00000239367 PRM1P04553 51 aa4.87□□□□□ -1.63
LRP11-201ENST00000239367 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
LRP11-201ENST00000239367 MT1AP04731 61 aa4.81□□□□□ -1.64
LRP11-201ENST00000239367 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
LRP11-201ENST00000239367 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
LRP11-201ENST00000239367 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
LRP11-201ENST00000239367 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
LRP11-201ENST00000239367 MDN1Q9NU22 5596 aa4.61□□□□□ -1.67
LRP11-201ENST00000239367 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
LRP11-201ENST00000239367 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
LRP11-201ENST00000239367 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
LRP11-201ENST00000239367 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
LRP11-201ENST00000239367 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
LRP11-201ENST00000239367 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
LRP11-201ENST00000239367 KRTAP6-3Q3LI67 103 aa4.42□□□□□ -1.7
LRP11-201ENST00000239367 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
LRP11-201ENST00000239367 SPRR2EP22531 72 aa4.32□□□□□ -1.72
LRP11-201ENST00000239367 SPRR2BP35325 72 aa4.32□□□□□ -1.72
LRP11-201ENST00000239367 SPRR2AP35326 72 aa4.32□□□□□ -1.72
LRP11-201ENST00000239367 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
LRP11-201ENST00000239367 MT3P25713 68 aa4.19□□□□□ -1.74
LRP11-201ENST00000239367 SPRR2DP22532 72 aa4.13□□□□□ -1.75
LRP11-201ENST00000239367 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
LRP11-201ENST00000239367 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.78
LRP11-201ENST00000239367 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
LRP11-201ENST00000239367 LCE1DQ5T752 114 aa3.82□□□□□ -1.8
LRP11-201ENST00000239367 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
LRP11-201ENST00000239367 MT4P47944 62 aa3.77□□□□□ -1.81
LRP11-201ENST00000239367 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
LRP11-201ENST00000239367 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
LRP11-201ENST00000239367 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
LRP11-201ENST00000239367 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
LRP11-201ENST00000239367 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
LRP11-201ENST00000239367 NEBP20929 6669 aa3.64□□□□□ -1.83
LRP11-201ENST00000239367 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
LRP11-201ENST00000239367 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
LRP11-201ENST00000239367 KRTAP5-3Q6L8H2 238 aa3.46□□□□□ -1.85
LRP11-201ENST00000239367 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
LRP11-201ENST00000239367 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
LRP11-201ENST00000239367 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
LRP11-201ENST00000239367 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
LRP11-201ENST00000239367 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
LRP11-201ENST00000239367 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
LRP11-201ENST00000239367 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
LRP11-201ENST00000239367 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
LRP11-201ENST00000239367 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
LRP11-201ENST00000239367 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
LRP11-201ENST00000239367 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
LRP11-201ENST00000239367 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
LRP11-201ENST00000239367 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
LRP11-201ENST00000239367 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
LRP11-201ENST00000239367 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
LRP11-201ENST00000239367 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
LRP11-201ENST00000239367 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
LRP11-201ENST00000239367 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
LRP11-201ENST00000239367 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
LRP11-201ENST00000239367 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
LRP11-201ENST00000239367 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
LRP11-201ENST00000239367 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 101.3 ms