RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 SPRR2DP22532 72 aa5.35□□□□□ -1.55
TMEM30A-201ENST00000230461 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
TMEM30A-201ENST00000230461 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.58
TMEM30A-201ENST00000230461 MT1MQ8N339 61 aa5.17□□□□□ -1.58
TMEM30A-201ENST00000230461 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
TMEM30A-201ENST00000230461 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
TMEM30A-201ENST00000230461 KRTAP9-6A0A140TA67 174 aa5.09□□□□□ -1.59
TMEM30A-201ENST00000230461 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
TMEM30A-201ENST00000230461 USH2AO75445 5202 aa5.07□□□□□ -1.6
TMEM30A-201ENST00000230461 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
TMEM30A-201ENST00000230461 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
TMEM30A-201ENST00000230461 KMT2DO14686 5537 aa4.91□□□□□ -1.62
TMEM30A-201ENST00000230461 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
TMEM30A-201ENST00000230461 KRTAP6-3Q3LI67 103 aa4.83□□□□□ -1.64
TMEM30A-201ENST00000230461 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
TMEM30A-201ENST00000230461 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.8□□□□□ -1.64
TMEM30A-201ENST00000230461 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
TMEM30A-201ENST00000230461 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
TMEM30A-201ENST00000230461 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
TMEM30A-201ENST00000230461 SSPOA2VEC9 5147 aa4.72□□□□□ -1.65
TMEM30A-201ENST00000230461 SYNE2Q8WXH0 6885 aaKnown RBP4.72□□□□□ -1.65
TMEM30A-201ENST00000230461 MT1AP04731 61 aa4.72□□□□□ -1.65
TMEM30A-201ENST00000230461 MT3P25713 68 aa4.72□□□□□ -1.65
TMEM30A-201ENST00000230461 MT4P47944 62 aa4.71□□□□□ -1.66
TMEM30A-201ENST00000230461 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
TMEM30A-201ENST00000230461 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
TMEM30A-201ENST00000230461 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
TMEM30A-201ENST00000230461 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
TMEM30A-201ENST00000230461 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
TMEM30A-201ENST00000230461 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
TMEM30A-201ENST00000230461 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
TMEM30A-201ENST00000230461 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
TMEM30A-201ENST00000230461 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
TMEM30A-201ENST00000230461 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
TMEM30A-201ENST00000230461 KRTAP6-1Q3LI64 71 aa4.5□□□□□ -1.69
TMEM30A-201ENST00000230461 KRTAP5-9P26371 169 aa4.47□□□□□ -1.69
TMEM30A-201ENST00000230461 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
TMEM30A-201ENST00000230461 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
TMEM30A-201ENST00000230461 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
TMEM30A-201ENST00000230461 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
TMEM30A-201ENST00000230461 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
TMEM30A-201ENST00000230461 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
TMEM30A-201ENST00000230461 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
TMEM30A-201ENST00000230461 PRM1P04553 51 aa4.24□□□□□ -1.73
TMEM30A-201ENST00000230461 MDN1Q9NU22 5596 aa4.22□□□□□ -1.73
TMEM30A-201ENST00000230461 NEBP20929 6669 aa4.17□□□□□ -1.74
TMEM30A-201ENST00000230461 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
TMEM30A-201ENST00000230461 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
TMEM30A-201ENST00000230461 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
TMEM30A-201ENST00000230461 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
TMEM30A-201ENST00000230461 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
TMEM30A-201ENST00000230461 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
TMEM30A-201ENST00000230461 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
TMEM30A-201ENST00000230461 KRTAP4-11Q9BYQ6 195 aa3.46□□□□□ -1.86
TMEM30A-201ENST00000230461 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
TMEM30A-201ENST00000230461 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
TMEM30A-201ENST00000230461 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
TMEM30A-201ENST00000230461 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
TMEM30A-201ENST00000230461 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
TMEM30A-201ENST00000230461 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
TMEM30A-201ENST00000230461 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
TMEM30A-201ENST00000230461 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
TMEM30A-201ENST00000230461 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
TMEM30A-201ENST00000230461 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
TMEM30A-201ENST00000230461 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
TMEM30A-201ENST00000230461 KRTAP5-8O75690 187 aa3□□□□□ -1.93
TMEM30A-201ENST00000230461 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
TMEM30A-201ENST00000230461 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
TMEM30A-201ENST00000230461 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
TMEM30A-201ENST00000230461 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
TMEM30A-201ENST00000230461 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
TMEM30A-201ENST00000230461 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
TMEM30A-201ENST00000230461 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
TMEM30A-201ENST00000230461 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
TMEM30A-201ENST00000230461 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
TMEM30A-201ENST00000230461 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
TMEM30A-201ENST00000230461 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms