RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
PXN-201ENST00000228307 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
PXN-201ENST00000228307 KRTAP19-6Q3LI70 58 aa5.28□□□□□ -1.56
PXN-201ENST00000228307 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
PXN-201ENST00000228307 MT1EP04732 61 aa5.25□□□□□ -1.57
PXN-201ENST00000228307 MT1GP13640 62 aa5.25□□□□□ -1.57
PXN-201ENST00000228307 MT1LQ93083 61 aa5.24□□□□□ -1.57
PXN-201ENST00000228307 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
PXN-201ENST00000228307 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
PXN-201ENST00000228307 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
PXN-201ENST00000228307 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.58
PXN-201ENST00000228307 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.58
PXN-201ENST00000228307 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.58
PXN-201ENST00000228307 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
PXN-201ENST00000228307 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
PXN-201ENST00000228307 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
PXN-201ENST00000228307 LCE2DQ5TA82 110 aaPredicted RBP5.03□□□□□ -1.6
PXN-201ENST00000228307 MDN1Q9NU22 5596 aa5.02□□□□□ -1.61
PXN-201ENST00000228307 SPRR2EP22531 72 aa4.99□□□□□ -1.61
PXN-201ENST00000228307 SPRR2BP35325 72 aa4.99□□□□□ -1.61
PXN-201ENST00000228307 SPRR2AP35326 72 aa4.99□□□□□ -1.61
PXN-201ENST00000228307 MT1MQ8N339 61 aa4.98□□□□□ -1.61
PXN-201ENST00000228307 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
PXN-201ENST00000228307 SPRR2DP22532 72 aa4.75□□□□□ -1.65
PXN-201ENST00000228307 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
PXN-201ENST00000228307 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
PXN-201ENST00000228307 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
PXN-201ENST00000228307 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
PXN-201ENST00000228307 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
PXN-201ENST00000228307 PRM1P04553 51 aa4.61□□□□□ -1.67
PXN-201ENST00000228307 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.6□□□□□ -1.67
PXN-201ENST00000228307 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
PXN-201ENST00000228307 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
PXN-201ENST00000228307 MT4P47944 62 aa4.43□□□□□ -1.7
PXN-201ENST00000228307 MT1AP04731 61 aa4.4□□□□□ -1.71
PXN-201ENST00000228307 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
PXN-201ENST00000228307 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
PXN-201ENST00000228307 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
PXN-201ENST00000228307 MT3P25713 68 aa4.17□□□□□ -1.74
PXN-201ENST00000228307 NEBP20929 6669 aa4.1□□□□□ -1.75
PXN-201ENST00000228307 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
PXN-201ENST00000228307 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
PXN-201ENST00000228307 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.76
PXN-201ENST00000228307 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
PXN-201ENST00000228307 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
PXN-201ENST00000228307 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
PXN-201ENST00000228307 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
PXN-201ENST00000228307 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
PXN-201ENST00000228307 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
PXN-201ENST00000228307 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
PXN-201ENST00000228307 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
PXN-201ENST00000228307 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
PXN-201ENST00000228307 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
PXN-201ENST00000228307 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
PXN-201ENST00000228307 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
PXN-201ENST00000228307 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
PXN-201ENST00000228307 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
PXN-201ENST00000228307 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
PXN-201ENST00000228307 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
PXN-201ENST00000228307 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
PXN-201ENST00000228307 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
PXN-201ENST00000228307 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
PXN-201ENST00000228307 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
PXN-201ENST00000228307 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
PXN-201ENST00000228307 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
PXN-201ENST00000228307 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
PXN-201ENST00000228307 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
PXN-201ENST00000228307 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
PXN-201ENST00000228307 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
PXN-201ENST00000228307 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
PXN-201ENST00000228307 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
PXN-201ENST00000228307 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
PXN-201ENST00000228307 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
PXN-201ENST00000228307 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
PXN-201ENST00000228307 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
PXN-201ENST00000228307 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
PXN-201ENST00000228307 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 43 ms