RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 MACF1Q9UPN3 7388 aaKnown RBP6.14□□□□□ -1.43
PRPF19-201ENST00000227524 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
PRPF19-201ENST00000227524 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
PRPF19-201ENST00000227524 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
PRPF19-201ENST00000227524 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
PRPF19-201ENST00000227524 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
PRPF19-201ENST00000227524 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
PRPF19-201ENST00000227524 MT1LQ93083 61 aa6□□□□□ -1.45
PRPF19-201ENST00000227524 MT1EP04732 61 aa5.97□□□□□ -1.45
PRPF19-201ENST00000227524 KRTAP6-3Q3LI67 103 aa5.97□□□□□ -1.45
PRPF19-201ENST00000227524 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
PRPF19-201ENST00000227524 KRTAP5-9P26371 169 aa5.74□□□□□ -1.49
PRPF19-201ENST00000227524 NEBP20929 6669 aa5.68□□□□□ -1.5
PRPF19-201ENST00000227524 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
PRPF19-201ENST00000227524 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
PRPF19-201ENST00000227524 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
PRPF19-201ENST00000227524 KRTAP19-3Q7Z4W3 81 aa5.65□□□□□ -1.5
PRPF19-201ENST00000227524 MT1GP13640 62 aa5.6□□□□□ -1.51
PRPF19-201ENST00000227524 MT1MQ8N339 61 aa5.57□□□□□ -1.52
PRPF19-201ENST00000227524 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
PRPF19-201ENST00000227524 MDN1Q9NU22 5596 aa5.55□□□□□ -1.52
PRPF19-201ENST00000227524 SPRR2EP22531 72 aa5.5□□□□□ -1.53
PRPF19-201ENST00000227524 SPRR2BP35325 72 aa5.5□□□□□ -1.53
PRPF19-201ENST00000227524 SPRR2AP35326 72 aa5.5□□□□□ -1.53
PRPF19-201ENST00000227524 KRTAP20-1Q3LI63 56 aa5.48□□□□□ -1.53
PRPF19-201ENST00000227524 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
PRPF19-201ENST00000227524 DSTQ03001 7570 aaKnown RBP5.4□□□□□ -1.55
PRPF19-201ENST00000227524 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
PRPF19-201ENST00000227524 SPRR2DP22532 72 aa5.32□□□□□ -1.56
PRPF19-201ENST00000227524 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
PRPF19-201ENST00000227524 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
PRPF19-201ENST00000227524 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
PRPF19-201ENST00000227524 MT1AP04731 61 aa5.12□□□□□ -1.59
PRPF19-201ENST00000227524 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
PRPF19-201ENST00000227524 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
PRPF19-201ENST00000227524 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
PRPF19-201ENST00000227524 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
PRPF19-201ENST00000227524 LCE3EQ5T5B0 92 aa4.92□□□□□ -1.62
PRPF19-201ENST00000227524 PRM1P04553 51 aa4.8□□□□□ -1.64
PRPF19-201ENST00000227524 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
PRPF19-201ENST00000227524 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.65
PRPF19-201ENST00000227524 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
PRPF19-201ENST00000227524 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
PRPF19-201ENST00000227524 MT4P47944 62 aa4.62□□□□□ -1.67
PRPF19-201ENST00000227524 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
PRPF19-201ENST00000227524 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
PRPF19-201ENST00000227524 MT3P25713 68 aa4.5□□□□□ -1.69
PRPF19-201ENST00000227524 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
PRPF19-201ENST00000227524 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
PRPF19-201ENST00000227524 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
PRPF19-201ENST00000227524 AHNAK2Q8IVF2 5795 aa4.35□□□□□ -1.71
PRPF19-201ENST00000227524 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
PRPF19-201ENST00000227524 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
PRPF19-201ENST00000227524 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
PRPF19-201ENST00000227524 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
PRPF19-201ENST00000227524 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.76
PRPF19-201ENST00000227524 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
PRPF19-201ENST00000227524 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
PRPF19-201ENST00000227524 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
PRPF19-201ENST00000227524 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
PRPF19-201ENST00000227524 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
PRPF19-201ENST00000227524 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
PRPF19-201ENST00000227524 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
PRPF19-201ENST00000227524 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
PRPF19-201ENST00000227524 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
PRPF19-201ENST00000227524 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
PRPF19-201ENST00000227524 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
PRPF19-201ENST00000227524 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
PRPF19-201ENST00000227524 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
PRPF19-201ENST00000227524 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
PRPF19-201ENST00000227524 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
PRPF19-201ENST00000227524 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
PRPF19-201ENST00000227524 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
PRPF19-201ENST00000227524 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
PRPF19-201ENST00000227524 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
PRPF19-201ENST00000227524 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
PRPF19-201ENST00000227524 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms