RNA–Protein interactions for RNA: ENST00000222990.7

SNX8-201, Transcript of sorting nexin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX8, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-201ENST00000222990 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
SNX8-201ENST00000222990 FSIP2Q5CZC0 6907 aa6.34□□□□□ -1.39
SNX8-201ENST00000222990 KRTAP19-7Q3SYF9 63 aa6.32□□□□□ -1.4
SNX8-201ENST00000222990 MT1MQ8N339 61 aa6.28□□□□□ -1.4
SNX8-201ENST00000222990 SPRR2DP22532 72 aa6.28□□□□□ -1.4
SNX8-201ENST00000222990 LCE3DQ9BYE3 92 aa6.28□□□□□ -1.4
SNX8-201ENST00000222990 LCE2DQ5TA82 110 aaPredicted RBP6.25□□□□□ -1.41
SNX8-201ENST00000222990 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.42
SNX8-201ENST00000222990 LCE3EQ5T5B0 92 aa6.19□□□□□ -1.42
SNX8-201ENST00000222990 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
SNX8-201ENST00000222990 KRTAP4-3Q9BYR4 195 aa6.16□□□□□ -1.42
SNX8-201ENST00000222990 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
SNX8-201ENST00000222990 KRTAP2-3P0C7H8 128 aa6.03□□□□□ -1.44
SNX8-201ENST00000222990 KRTAP2-4Q9BYR9 128 aa6.03□□□□□ -1.44
SNX8-201ENST00000222990 KRTAP2-1Q9BYU5 128 aa6.03□□□□□ -1.44
SNX8-201ENST00000222990 KRTAP9-6A8MVA2 160 aa5.96□□□□□ -1.46
SNX8-201ENST00000222990 MT3P25713 68 aa5.83□□□□□ -1.48
SNX8-201ENST00000222990 MT1AP04731 61 aa5.8□□□□□ -1.48
SNX8-201ENST00000222990 PRM1P04553 51 aa5.72□□□□□ -1.49
SNX8-201ENST00000222990 USH2AO75445 5202 aa5.7□□□□□ -1.5
SNX8-201ENST00000222990 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
SNX8-201ENST00000222990 KRTAP9-7A8MTY7 169 aa5.67□□□□□ -1.5
SNX8-201ENST00000222990 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.51
SNX8-201ENST00000222990 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.62□□□□□ -1.51
SNX8-201ENST00000222990 OBSCNQ5VST9 7968 aa5.61□□□□□ -1.51
SNX8-201ENST00000222990 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
SNX8-201ENST00000222990 MT4P47944 62 aa5.56□□□□□ -1.52
SNX8-201ENST00000222990 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
SNX8-201ENST00000222990 KMT2DO14686 5537 aa5.55□□□□□ -1.52
SNX8-201ENST00000222990 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
SNX8-201ENST00000222990 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
SNX8-201ENST00000222990 KRTAP6-3Q3LI67 103 aa5.51□□□□□ -1.53
SNX8-201ENST00000222990 DSTQ03001 7570 aaKnown RBP5.48□□□□□ -1.53
SNX8-201ENST00000222990 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
SNX8-201ENST00000222990 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
SNX8-201ENST00000222990 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
SNX8-201ENST00000222990 KRTAP6-2Q3LI66 62 aa5.3□□□□□ -1.56
SNX8-201ENST00000222990 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
SNX8-201ENST00000222990 LCE1BQ5T7P3 118 aa5.28□□□□□ -1.56
SNX8-201ENST00000222990 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
SNX8-201ENST00000222990 MUC12Q9UKN1 5478 aa5.19□□□□□ -1.58
SNX8-201ENST00000222990 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
SNX8-201ENST00000222990 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
SNX8-201ENST00000222990 KRTAP5-9P26371 169 aa5□□□□□ -1.61
SNX8-201ENST00000222990 NEBP20929 6669 aa4.87□□□□□ -1.63
SNX8-201ENST00000222990 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
SNX8-201ENST00000222990 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
SNX8-201ENST00000222990 KRTAP20-2Q3LI61 65 aa4.47□□□□□ -1.69
SNX8-201ENST00000222990 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
SNX8-201ENST00000222990 MUC19Q7Z5P9 8384 aa4.35□□□□□ -1.71
SNX8-201ENST00000222990 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
SNX8-201ENST00000222990 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
SNX8-201ENST00000222990 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
SNX8-201ENST00000222990 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
SNX8-201ENST00000222990 GPR98Q8WXG9 6306 aa4.17□□□□□ -1.74
SNX8-201ENST00000222990 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
SNX8-201ENST00000222990 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
SNX8-201ENST00000222990 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
SNX8-201ENST00000222990 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
SNX8-201ENST00000222990 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
SNX8-201ENST00000222990 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
SNX8-201ENST00000222990 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
SNX8-201ENST00000222990 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
SNX8-201ENST00000222990 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
SNX8-201ENST00000222990 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
SNX8-201ENST00000222990 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
SNX8-201ENST00000222990 KRTAP5-8O75690 187 aa3.4□□□□□ -1.86
SNX8-201ENST00000222990 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.9
SNX8-201ENST00000222990 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
SNX8-201ENST00000222990 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
SNX8-201ENST00000222990 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
SNX8-201ENST00000222990 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
SNX8-201ENST00000222990 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
SNX8-201ENST00000222990 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
SNX8-201ENST00000222990 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
SNX8-201ENST00000222990 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
SNX8-201ENST00000222990 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 49 ms