RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
CACTIN-201ENST00000221899 KRTAP4-3Q9BYR4 195 aa6.12□□□□□ -1.43
CACTIN-201ENST00000221899 FCGBPQ9Y6R7 5405 aaPredicted RBP6.03□□□□□ -1.44
CACTIN-201ENST00000221899 MT1GP13640 62 aa6.03□□□□□ -1.44
CACTIN-201ENST00000221899 KRTAP19-6Q3LI70 58 aa6.01□□□□□ -1.45
CACTIN-201ENST00000221899 MUC12Q9UKN1 5478 aa6.01□□□□□ -1.45
CACTIN-201ENST00000221899 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
CACTIN-201ENST00000221899 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
CACTIN-201ENST00000221899 MT1MQ8N339 61 aa5.9□□□□□ -1.46
CACTIN-201ENST00000221899 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
CACTIN-201ENST00000221899 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
CACTIN-201ENST00000221899 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
CACTIN-201ENST00000221899 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
CACTIN-201ENST00000221899 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.5
CACTIN-201ENST00000221899 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
CACTIN-201ENST00000221899 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
CACTIN-201ENST00000221899 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
CACTIN-201ENST00000221899 SYNE1Q8NF91 8797 aaKnown RBP5.48□□□□□ -1.53
CACTIN-201ENST00000221899 MACF1Q9UPN3 7388 aaKnown RBP5.46□□□□□ -1.53
CACTIN-201ENST00000221899 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
CACTIN-201ENST00000221899 MDN1Q9NU22 5596 aa5.36□□□□□ -1.55
CACTIN-201ENST00000221899 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
CACTIN-201ENST00000221899 MT1AP04731 61 aa5.33□□□□□ -1.56
CACTIN-201ENST00000221899 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
CACTIN-201ENST00000221899 LCE3DQ9BYE3 92 aa5.27□□□□□ -1.57
CACTIN-201ENST00000221899 LCE3EQ5T5B0 92 aa5.21□□□□□ -1.58
CACTIN-201ENST00000221899 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
CACTIN-201ENST00000221899 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
CACTIN-201ENST00000221899 KRTAP6-3Q3LI67 103 aa5.17□□□□□ -1.58
CACTIN-201ENST00000221899 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.58
CACTIN-201ENST00000221899 PRM1P04553 51 aa5.11□□□□□ -1.59
CACTIN-201ENST00000221899 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
CACTIN-201ENST00000221899 SPRR2EP22531 72 aa5.07□□□□□ -1.6
CACTIN-201ENST00000221899 SPRR2BP35325 72 aa5.07□□□□□ -1.6
CACTIN-201ENST00000221899 SPRR2AP35326 72 aa5.07□□□□□ -1.6
CACTIN-201ENST00000221899 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
CACTIN-201ENST00000221899 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
CACTIN-201ENST00000221899 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
CACTIN-201ENST00000221899 SPRR2DP22532 72 aa4.83□□□□□ -1.64
CACTIN-201ENST00000221899 MT3P25713 68 aa4.75□□□□□ -1.65
CACTIN-201ENST00000221899 NEBP20929 6669 aa4.73□□□□□ -1.65
CACTIN-201ENST00000221899 KRTAP20-1Q3LI63 56 aa4.57□□□□□ -1.68
CACTIN-201ENST00000221899 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
CACTIN-201ENST00000221899 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.7
CACTIN-201ENST00000221899 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
CACTIN-201ENST00000221899 MT4P47944 62 aa4.34□□□□□ -1.71
CACTIN-201ENST00000221899 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
CACTIN-201ENST00000221899 LCE4AQ5TA78 99 aa4.21□□□□□ -1.73
CACTIN-201ENST00000221899 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
CACTIN-201ENST00000221899 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
CACTIN-201ENST00000221899 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
CACTIN-201ENST00000221899 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.76
CACTIN-201ENST00000221899 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
CACTIN-201ENST00000221899 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
CACTIN-201ENST00000221899 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
CACTIN-201ENST00000221899 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
CACTIN-201ENST00000221899 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
CACTIN-201ENST00000221899 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
CACTIN-201ENST00000221899 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.82
CACTIN-201ENST00000221899 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
CACTIN-201ENST00000221899 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
CACTIN-201ENST00000221899 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.84
CACTIN-201ENST00000221899 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
CACTIN-201ENST00000221899 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
CACTIN-201ENST00000221899 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.85
CACTIN-201ENST00000221899 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
CACTIN-201ENST00000221899 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
CACTIN-201ENST00000221899 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
CACTIN-201ENST00000221899 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
CACTIN-201ENST00000221899 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.9
CACTIN-201ENST00000221899 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
CACTIN-201ENST00000221899 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
CACTIN-201ENST00000221899 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
CACTIN-201ENST00000221899 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
CACTIN-201ENST00000221899 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
CACTIN-201ENST00000221899 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
CACTIN-201ENST00000221899 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 238.4 ms