RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
RABGGTA-201ENST00000216840 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
RABGGTA-201ENST00000216840 KRTAP9-6A8MVA2 160 aa5.89□□□□□ -1.47
RABGGTA-201ENST00000216840 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
RABGGTA-201ENST00000216840 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
RABGGTA-201ENST00000216840 MUC12Q9UKN1 5478 aa5.87□□□□□ -1.47
RABGGTA-201ENST00000216840 MT1GP13640 62 aa5.84□□□□□ -1.47
RABGGTA-201ENST00000216840 MT1MQ8N339 61 aa5.81□□□□□ -1.48
RABGGTA-201ENST00000216840 KRTAP5-9P26371 169 aa5.76□□□□□ -1.49
RABGGTA-201ENST00000216840 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
RABGGTA-201ENST00000216840 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
RABGGTA-201ENST00000216840 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
RABGGTA-201ENST00000216840 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
RABGGTA-201ENST00000216840 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
RABGGTA-201ENST00000216840 INE1O15225 51 aa5.63□□□□□ -1.51
RABGGTA-201ENST00000216840 LOC100996750A0A140TA64 210 aa5.61□□□□□ -1.51
RABGGTA-201ENST00000216840 LCE1AQ5T7P2 110 aa5.59□□□□□ -1.51
RABGGTA-201ENST00000216840 MDN1Q9NU22 5596 aa5.54□□□□□ -1.52
RABGGTA-201ENST00000216840 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
RABGGTA-201ENST00000216840 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
RABGGTA-201ENST00000216840 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
RABGGTA-201ENST00000216840 SPRR2EP22531 72 aa5.51□□□□□ -1.53
RABGGTA-201ENST00000216840 SPRR2BP35325 72 aa5.51□□□□□ -1.53
RABGGTA-201ENST00000216840 SPRR2AP35326 72 aa5.51□□□□□ -1.53
RABGGTA-201ENST00000216840 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
RABGGTA-201ENST00000216840 NEBP20929 6669 aa5.3□□□□□ -1.56
RABGGTA-201ENST00000216840 SPRR2DP22532 72 aa5.3□□□□□ -1.56
RABGGTA-201ENST00000216840 KRTAP5-5Q701N2 237 aaPredicted RBP5.21□□□□□ -1.58
RABGGTA-201ENST00000216840 MT1AP04731 61 aa5.16□□□□□ -1.58
RABGGTA-201ENST00000216840 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
RABGGTA-201ENST00000216840 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
RABGGTA-201ENST00000216840 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
RABGGTA-201ENST00000216840 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.61
RABGGTA-201ENST00000216840 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
RABGGTA-201ENST00000216840 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
RABGGTA-201ENST00000216840 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
RABGGTA-201ENST00000216840 KRTAP5-4Q6L8H1 288 aa4.84□□□□□ -1.63
RABGGTA-201ENST00000216840 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
RABGGTA-201ENST00000216840 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
RABGGTA-201ENST00000216840 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
RABGGTA-201ENST00000216840 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
RABGGTA-201ENST00000216840 MT3P25713 68 aa4.65□□□□□ -1.66
RABGGTA-201ENST00000216840 KRTAP4-6Q9BYQ5 205 aa4.63□□□□□ -1.67
RABGGTA-201ENST00000216840 MT4P47944 62 aa4.61□□□□□ -1.67
RABGGTA-201ENST00000216840 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
RABGGTA-201ENST00000216840 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
RABGGTA-201ENST00000216840 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
RABGGTA-201ENST00000216840 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
RABGGTA-201ENST00000216840 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
RABGGTA-201ENST00000216840 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
RABGGTA-201ENST00000216840 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
RABGGTA-201ENST00000216840 PRM1P04553 51 aa4.12□□□□□ -1.75
RABGGTA-201ENST00000216840 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
RABGGTA-201ENST00000216840 LCE1EQ5T753 118 aa3.96□□□□□ -1.77
RABGGTA-201ENST00000216840 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
RABGGTA-201ENST00000216840 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
RABGGTA-201ENST00000216840 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
RABGGTA-201ENST00000216840 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
RABGGTA-201ENST00000216840 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
RABGGTA-201ENST00000216840 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
RABGGTA-201ENST00000216840 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
RABGGTA-201ENST00000216840 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
RABGGTA-201ENST00000216840 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
RABGGTA-201ENST00000216840 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
RABGGTA-201ENST00000216840 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
RABGGTA-201ENST00000216840 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
RABGGTA-201ENST00000216840 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
RABGGTA-201ENST00000216840 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
RABGGTA-201ENST00000216840 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
RABGGTA-201ENST00000216840 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
RABGGTA-201ENST00000216840 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
RABGGTA-201ENST00000216840 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
RABGGTA-201ENST00000216840 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
RABGGTA-201ENST00000216840 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
RABGGTA-201ENST00000216840 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
RABGGTA-201ENST00000216840 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
RABGGTA-201ENST00000216840 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 56.7 ms