RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 FREM2Q5SZK8 3169 aa-0.11□□□□□ -2.43
CDKN3-201ENST00000216414 SACSQ9NZJ4 4579 aa-0.11□□□□□ -2.43
CDKN3-201ENST00000216414 CMYA5Q8N3K9 4069 aa-0.11□□□□□ -2.43
CDKN3-201ENST00000216414 LINC01556Q5JQF7 62 aa-0.11□□□□□ -2.43
CDKN3-201ENST00000216414 SPENQ96T58 3664 aaKnown RBP-0.11□□□□□ -2.43
CDKN3-201ENST00000216414 TRRAPQ9Y4A5 3859 aa-0.11□□□□□ -2.43
CDKN3-201ENST00000216414 HERC2O95714 4834 aa-0.11□□□□□ -2.43
CDKN3-201ENST00000216414 DMXL2Q8TDJ6 3036 aa-0.11□□□□□ -2.43
CDKN3-201ENST00000216414 DNAH7Q8WXX0 4024 aa-0.11□□□□□ -2.43
CDKN3-201ENST00000216414 PLECQ15149 4684 aaKnown RBP-0.12□□□□□ -2.43
CDKN3-201ENST00000216414 PRUNE2Q8WUY3 3088 aa-0.12□□□□□ -2.43
CDKN3-201ENST00000216414 GCC2Q8IWJ2 1684 aa-0.12□□□□□ -2.43
CDKN3-201ENST00000216414 CFAP54Q96N23 3096 aa-0.12□□□□□ -2.43
CDKN3-201ENST00000216414 USH2AO75445 5202 aa-0.12□□□□□ -2.43
CDKN3-201ENST00000216414 CSMD1Q96PZ7 3565 aa-0.12□□□□□ -2.43
CDKN3-201ENST00000216414 SPTBN5Q9NRC6 3674 aaKnown RBP-0.13□□□□□ -2.43
CDKN3-201ENST00000216414 BOD1L1Q8NFC6 3051 aa-0.13□□□□□ -2.43
CDKN3-201ENST00000216414 MT1FP04733 61 aa-0.13□□□□□ -2.43
CDKN3-201ENST00000216414 FRYLO94915 3013 aa-0.13□□□□□ -2.43
CDKN3-201ENST00000216414 CSMD2Q7Z408 3487 aa-0.13□□□□□ -2.43
CDKN3-201ENST00000216414 ZFHX4Q86UP3 3567 aa-0.14□□□□□ -2.43
CDKN3-201ENST00000216414 APOBP04114 4563 aaKnown RBP-0.14□□□□□ -2.43
CDKN3-201ENST00000216414 RYR1P21817 5038 aa-0.14□□□□□ -2.43
CDKN3-201ENST00000216414 DEFB104AQ8WTQ1 72 aa-0.14□□□□□ -2.43
CDKN3-201ENST00000216414 COX14Q96I36 57 aa-0.14□□□□□ -2.43
CDKN3-201ENST00000216414 EPPK1P58107 5090 aaKnown RBP-0.14□□□□□ -2.43
CDKN3-201ENST00000216414 DNHD1Q96M86 4753 aa-0.14□□□□□ -2.43
CDKN3-201ENST00000216414 BIRC6Q9NR09 4857 aa-0.15□□□□□ -2.43
CDKN3-201ENST00000216414 DNAH17Q9UFH2 4485 aa-0.15□□□□□ -2.43
CDKN3-201ENST00000216414 APELAP0DMC3 54 aa-0.15□□□□□ -2.43
CDKN3-201ENST00000216414 KIAA1109Q2LD37 5005 aa-0.15□□□□□ -2.43
CDKN3-201ENST00000216414 SMG1Q96Q15 3661 aaKnown RBP-0.16□□□□□ -2.43
CDKN3-201ENST00000216414 HYDINQ4G0P3 5121 aa-0.16□□□□□ -2.43
CDKN3-201ENST00000216414 RYR3Q15413 4870 aa-0.16□□□□□ -2.43
CDKN3-201ENST00000216414 HTN3P15516 51 aa-0.16□□□□□ -2.44
CDKN3-201ENST00000216414 DYNC1H1Q14204 4646 aaKnown RBP-0.16□□□□□ -2.44
CDKN3-201ENST00000216414 CEP350Q5VT06 3117 aa-0.16□□□□□ -2.44
CDKN3-201ENST00000216414 A0A096LPF7 62 aa-0.17□□□□□ -2.44
CDKN3-201ENST00000216414 DEFB108AA8MXU0 73 aa-0.17□□□□□ -2.44
CDKN3-201ENST00000216414 KRTAP20-1Q3LI63 56 aa-0.17□□□□□ -2.44
CDKN3-201ENST00000216414 RPL39P5Q59GN2 51 aa-0.18□□□□□ -2.44
CDKN3-201ENST00000216414 DNAH10Q8IVF4 4471 aa-0.18□□□□□ -2.44
CDKN3-201ENST00000216414 VPS13CQ709C8 3753 aa-0.18□□□□□ -2.44
CDKN3-201ENST00000216414 RNF213Q63HN8 5207 aa-0.18□□□□□ -2.44
CDKN3-201ENST00000216414 DNAH5Q8TE73 4624 aa-0.18□□□□□ -2.44
CDKN3-201ENST00000216414 RYR2Q92736 4967 aa-0.19□□□□□ -2.44
CDKN3-201ENST00000216414 H3BSH0 61 aa-0.19□□□□□ -2.44
CDKN3-201ENST00000216414 SPEGQ15772 3267 aa-0.2□□□□□ -2.44
CDKN3-201ENST00000216414 DNAH12Q6ZR08 3092 aa-0.2□□□□□ -2.44
CDKN3-201ENST00000216414 PCNTO95613 3336 aa-0.2□□□□□ -2.44
CDKN3-201ENST00000216414 DMDP11532 3685 aa-0.21□□□□□ -2.44
CDKN3-201ENST00000216414 MYO15AQ9UKN7 3530 aa-0.21□□□□□ -2.44
CDKN3-201ENST00000216414 EP400Q96L91 3159 aa-0.22□□□□□ -2.44
CDKN3-201ENST00000216414 DCHS1Q96JQ0 3298 aa-0.22□□□□□ -2.44
CDKN3-201ENST00000216414 SZT2Q5T011 3432 aa-0.22□□□□□ -2.44
CDKN3-201ENST00000216414 KRTAP19-6Q3LI70 58 aa-0.22□□□□□ -2.44
CDKN3-201ENST00000216414 DEFB108BQ8NET1 73 aa-0.22□□□□□ -2.44
CDKN3-201ENST00000216414 WDFY3Q8IZQ1 3526 aa-0.22□□□□□ -2.45
CDKN3-201ENST00000216414 MKI67P46013 3256 aaKnown RBP-0.23□□□□□ -2.45
CDKN3-201ENST00000216414 WDFY4Q6ZS81 3184 aa-0.24□□□□□ -2.45
CDKN3-201ENST00000216414 ABCA13Q86UQ4 5058 aa-0.24□□□□□ -2.45
CDKN3-201ENST00000216414 LOC400499M0QZD8 3231 aa-0.25□□□□□ -2.45
CDKN3-201ENST00000216414 UNC80Q8N2C7 3258 aa-0.25□□□□□ -2.45
CDKN3-201ENST00000216414 XIRP2A4UGR9 3374 aa-0.25□□□□□ -2.45
CDKN3-201ENST00000216414 USP34Q70CQ2 3546 aa-0.25□□□□□ -2.45
CDKN3-201ENST00000216414 CFAP47Q6ZTR5 3102 aa-0.25□□□□□ -2.45
CDKN3-201ENST00000216414 MUC3AQ02505 3323 aa-0.26□□□□□ -2.45
CDKN3-201ENST00000216414 ASPMQ8IZT6 3477 aa-0.26□□□□□ -2.45
CDKN3-201ENST00000216414 VCANP13611 3396 aa-0.28□□□□□ -2.45
CDKN3-201ENST00000216414 DNAH14Q0VDD8 3507 aa-0.28□□□□□ -2.45
CDKN3-201ENST00000216414 CENPFP49454 3210 aa-0.3□□□□□ -2.46
CDKN3-201ENST00000216414 BRCA2P51587 3418 aa-0.31□□□□□ -2.46
CDKN3-201ENST00000216414 CDH23Q9H251 3354 aa-0.31□□□□□ -2.46
CDKN3-201ENST00000216414 VPS13AQ96RL7 3174 aa-0.31□□□□□ -2.46
CDKN3-201ENST00000216414 STATHP02808 62 aa-0.33□□□□□ -2.46
CDKN3-201ENST00000216414 KRTAP19-2Q3LHN2 52 aa-0.33□□□□□ -2.46
CDKN3-201ENST00000216414 UTRNP46939 3433 aa-0.37□□□□□ -2.47
CDKN3-201ENST00000216414 GOLGB1Q14789 3259 aaKnown RBP-0.37□□□□□ -2.47
Retrieved 78 of 20,778 RNA–protein pairs in 92.6 ms