RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 KRTAP19-4Q3LI73 84 aa2.72□□□□□ -1.97
HMGXB4-201ENST00000216106 KRTAP9-2Q9BYQ4 174 aa2.68□□□□□ -1.98
HMGXB4-201ENST00000216106 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
HMGXB4-201ENST00000216106 KRTAP19-3Q7Z4W3 81 aa2.68□□□□□ -1.98
HMGXB4-201ENST00000216106 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
HMGXB4-201ENST00000216106 SPRR2FQ96RM1 72 aa2.67□□□□□ -1.98
HMGXB4-201ENST00000216106 MT1MQ8N339 61 aa2.65□□□□□ -1.98
HMGXB4-201ENST00000216106 MT1GP13640 62 aa2.65□□□□□ -1.99
HMGXB4-201ENST00000216106 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
HMGXB4-201ENST00000216106 CRCT1Q9UGL9 99 aa2.6□□□□□ -1.99
HMGXB4-201ENST00000216106 LCE5AQ5TCM9 118 aa2.6□□□□□ -1.99
HMGXB4-201ENST00000216106 KRTAP2-3P0C7H8 128 aa2.6□□□□□ -1.99
HMGXB4-201ENST00000216106 KRTAP2-4Q9BYR9 128 aa2.6□□□□□ -1.99
HMGXB4-201ENST00000216106 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
HMGXB4-201ENST00000216106 LCE4AQ5TA78 99 aa2.59□□□□□ -1.99
HMGXB4-201ENST00000216106 SYNE2Q8WXH0 6885 aaKnown RBP2.59□□□□□ -1.99
HMGXB4-201ENST00000216106 MDN1Q9NU22 5596 aa2.57□□□□□ -2
HMGXB4-201ENST00000216106 INE1O15225 51 aa2.55□□□□□ -2
HMGXB4-201ENST00000216106 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
HMGXB4-201ENST00000216106 LCE3BQ5TA77 95 aa2.52□□□□□ -2.01
HMGXB4-201ENST00000216106 LCE1AQ5T7P2 110 aa2.5□□□□□ -2.01
HMGXB4-201ENST00000216106 SPRR2EP22531 72 aa2.46□□□□□ -2.01
HMGXB4-201ENST00000216106 SPRR2BP35325 72 aa2.46□□□□□ -2.01
HMGXB4-201ENST00000216106 SPRR2AP35326 72 aa2.46□□□□□ -2.01
HMGXB4-201ENST00000216106 KRTAP9-6A0A140TA67 174 aa2.46□□□□□ -2.02
HMGXB4-201ENST00000216106 KRTAP9-7A8MTY7 169 aa2.46□□□□□ -2.02
HMGXB4-201ENST00000216106 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.42□□□□□ -2.02
HMGXB4-201ENST00000216106 KRTAP6-1Q3LI64 71 aa2.38□□□□□ -2.03
HMGXB4-201ENST00000216106 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
HMGXB4-201ENST00000216106 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
HMGXB4-201ENST00000216106 SPRR2DP22532 72 aa2.36□□□□□ -2.03
HMGXB4-201ENST00000216106 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
HMGXB4-201ENST00000216106 MT1AP04731 61 aa2.35□□□□□ -2.03
HMGXB4-201ENST00000216106 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
HMGXB4-201ENST00000216106 KRTAP9-4Q9BYQ2 154 aa2.33□□□□□ -2.04
HMGXB4-201ENST00000216106 KRTAP4-9Q9BYQ8 210 aa2.31□□□□□ -2.04
HMGXB4-201ENST00000216106 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
HMGXB4-201ENST00000216106 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
HMGXB4-201ENST00000216106 LCE1DQ5T752 114 aa2.21□□□□□ -2.06
HMGXB4-201ENST00000216106 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
HMGXB4-201ENST00000216106 NEBP20929 6669 aa2.17□□□□□ -2.06
HMGXB4-201ENST00000216106 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
HMGXB4-201ENST00000216106 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
HMGXB4-201ENST00000216106 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
HMGXB4-201ENST00000216106 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
HMGXB4-201ENST00000216106 MT3P25713 68 aa2.12□□□□□ -2.07
HMGXB4-201ENST00000216106 MT4P47944 62 aa2.09□□□□□ -2.07
HMGXB4-201ENST00000216106 KRTAP4-2Q9BYR5 136 aa2.08□□□□□ -2.08
HMGXB4-201ENST00000216106 KRTAP4-11Q9BYQ6 195 aa2.05□□□□□ -2.08
HMGXB4-201ENST00000216106 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
HMGXB4-201ENST00000216106 KRTAP2-2Q9BYT5 123 aa2.01□□□□□ -2.09
HMGXB4-201ENST00000216106 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
HMGXB4-201ENST00000216106 PRM1P04553 51 aa2□□□□□ -2.09
HMGXB4-201ENST00000216106 KRTAP5-3Q6L8H2 238 aa2□□□□□ -2.09
HMGXB4-201ENST00000216106 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
HMGXB4-201ENST00000216106 KRTAP20-1Q3LI63 56 aa1.95□□□□□ -2.1
HMGXB4-201ENST00000216106 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
HMGXB4-201ENST00000216106 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
HMGXB4-201ENST00000216106 LCE1EQ5T753 118 aa1.76□□□□□ -2.13
HMGXB4-201ENST00000216106 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
HMGXB4-201ENST00000216106 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
HMGXB4-201ENST00000216106 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
HMGXB4-201ENST00000216106 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
HMGXB4-201ENST00000216106 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
HMGXB4-201ENST00000216106 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
HMGXB4-201ENST00000216106 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
HMGXB4-201ENST00000216106 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
HMGXB4-201ENST00000216106 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
HMGXB4-201ENST00000216106 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
HMGXB4-201ENST00000216106 GPR98Q8WXG9 6306 aa1.49□□□□□ -2.17
HMGXB4-201ENST00000216106 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
HMGXB4-201ENST00000216106 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
HMGXB4-201ENST00000216106 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
HMGXB4-201ENST00000216106 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
HMGXB4-201ENST00000216106 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
HMGXB4-201ENST00000216106 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
HMGXB4-201ENST00000216106 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 7.4 ms