RNA–Protein interactions for RNA: ENST00000198767.10

RRN3-201, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRN3, Length 3,762 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-201ENST00000198767 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.92
RRN3-201ENST00000198767 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
RRN3-201ENST00000198767 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
RRN3-201ENST00000198767 KRTAP9-2Q9BYQ4 174 aa3.06□□□□□ -1.92
RRN3-201ENST00000198767 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
RRN3-201ENST00000198767 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
RRN3-201ENST00000198767 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
RRN3-201ENST00000198767 MT1EP04732 61 aa3□□□□□ -1.93
RRN3-201ENST00000198767 MT1LQ93083 61 aa2.98□□□□□ -1.93
RRN3-201ENST00000198767 MT1GP13640 62 aa2.96□□□□□ -1.94
RRN3-201ENST00000198767 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
RRN3-201ENST00000198767 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
RRN3-201ENST00000198767 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
RRN3-201ENST00000198767 MDN1Q9NU22 5596 aa2.9□□□□□ -1.95
RRN3-201ENST00000198767 KRTAP19-3Q7Z4W3 81 aa2.88□□□□□ -1.95
RRN3-201ENST00000198767 SPRR2EP22531 72 aa2.86□□□□□ -1.95
RRN3-201ENST00000198767 SPRR2BP35325 72 aa2.86□□□□□ -1.95
RRN3-201ENST00000198767 SPRR2AP35326 72 aa2.86□□□□□ -1.95
RRN3-201ENST00000198767 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
RRN3-201ENST00000198767 MT1MQ8N339 61 aa2.84□□□□□ -1.95
RRN3-201ENST00000198767 KRTAP4-9Q9BYQ8 210 aa2.84□□□□□ -1.95
RRN3-201ENST00000198767 LCE3BQ5TA77 95 aa2.78□□□□□ -1.96
RRN3-201ENST00000198767 SPRR2DP22532 72 aa2.74□□□□□ -1.97
RRN3-201ENST00000198767 KRTAP9-6A0A140TA67 174 aa2.73□□□□□ -1.97
RRN3-201ENST00000198767 LCE5AQ5TCM9 118 aa2.71□□□□□ -1.98
RRN3-201ENST00000198767 LCE1AQ5T7P2 110 aa2.69□□□□□ -1.98
RRN3-201ENST00000198767 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.69□□□□□ -1.98
RRN3-201ENST00000198767 KRTAP19-4Q3LI73 84 aa2.68□□□□□ -1.98
RRN3-201ENST00000198767 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
RRN3-201ENST00000198767 LCE4AQ5TA78 99 aa2.65□□□□□ -1.99
RRN3-201ENST00000198767 KRTAP9-7A8MTY7 169 aa2.63□□□□□ -1.99
RRN3-201ENST00000198767 KRTAP6-1Q3LI64 71 aa2.58□□□□□ -2
RRN3-201ENST00000198767 PRM1P04553 51 aa2.56□□□□□ -2
RRN3-201ENST00000198767 KRTAP5-9P26371 169 aa2.55□□□□□ -2
RRN3-201ENST00000198767 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
RRN3-201ENST00000198767 MT4P47944 62 aa2.53□□□□□ -2
RRN3-201ENST00000198767 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
RRN3-201ENST00000198767 MT1AP04731 61 aa2.49□□□□□ -2.01
RRN3-201ENST00000198767 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
RRN3-201ENST00000198767 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
RRN3-201ENST00000198767 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
RRN3-201ENST00000198767 NEBP20929 6669 aa2.45□□□□□ -2.02
RRN3-201ENST00000198767 KRTAP9-9Q9BYP9 154 aa2.43□□□□□ -2.02
RRN3-201ENST00000198767 KRTAP9-4Q9BYQ2 154 aa2.43□□□□□ -2.02
RRN3-201ENST00000198767 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
RRN3-201ENST00000198767 LCE1DQ5T752 114 aa2.35□□□□□ -2.03
RRN3-201ENST00000198767 MT3P25713 68 aa2.35□□□□□ -2.03
RRN3-201ENST00000198767 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
RRN3-201ENST00000198767 KRTAP2-2Q9BYT5 123 aa2.26□□□□□ -2.05
RRN3-201ENST00000198767 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
RRN3-201ENST00000198767 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
RRN3-201ENST00000198767 KRTAP4-11Q9BYQ6 195 aa2.18□□□□□ -2.06
RRN3-201ENST00000198767 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
RRN3-201ENST00000198767 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
RRN3-201ENST00000198767 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
RRN3-201ENST00000198767 KRTAP5-4Q6L8H1 288 aa2.1□□□□□ -2.07
RRN3-201ENST00000198767 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
RRN3-201ENST00000198767 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
RRN3-201ENST00000198767 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
RRN3-201ENST00000198767 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
RRN3-201ENST00000198767 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.1
RRN3-201ENST00000198767 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
RRN3-201ENST00000198767 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
RRN3-201ENST00000198767 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
RRN3-201ENST00000198767 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
RRN3-201ENST00000198767 LCE1FQ5T754 118 aa1.74□□□□□ -2.13
RRN3-201ENST00000198767 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
RRN3-201ENST00000198767 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
RRN3-201ENST00000198767 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
RRN3-201ENST00000198767 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
RRN3-201ENST00000198767 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
RRN3-201ENST00000198767 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
RRN3-201ENST00000198767 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
RRN3-201ENST00000198767 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
RRN3-201ENST00000198767 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
RRN3-201ENST00000198767 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
RRN3-201ENST00000198767 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 55.8 ms