RNA–Protein interactions for RNA: ENST00000194530.7

STRADB-201, Transcript of STE20-related kinase adaptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STRADB, Length 2,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-201ENST00000194530 MT1GP13640 62 aa6.76□□□□□ -1.33
STRADB-201ENST00000194530 KRTAP19-3Q7Z4W3 81 aa6.76□□□□□ -1.33
STRADB-201ENST00000194530 KRTAP4-3Q9BYR4 195 aa6.75□□□□□ -1.33
STRADB-201ENST00000194530 MT1MQ8N339 61 aa6.74□□□□□ -1.33
STRADB-201ENST00000194530 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
STRADB-201ENST00000194530 FSIP2Q5CZC0 6907 aa6.7□□□□□ -1.34
STRADB-201ENST00000194530 FCGBPQ9Y6R7 5405 aaPredicted RBP6.63□□□□□ -1.35
STRADB-201ENST00000194530 MUC12Q9UKN1 5478 aa6.55□□□□□ -1.36
STRADB-201ENST00000194530 LCE5AQ5TCM9 118 aa6.52□□□□□ -1.37
STRADB-201ENST00000194530 SPRR2FQ96RM1 72 aa6.5□□□□□ -1.37
STRADB-201ENST00000194530 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
STRADB-201ENST00000194530 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
STRADB-201ENST00000194530 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
STRADB-201ENST00000194530 MACF1Q9UPN3 7388 aaKnown RBP6.18□□□□□ -1.42
STRADB-201ENST00000194530 DSTQ03001 7570 aaKnown RBP6.17□□□□□ -1.42
STRADB-201ENST00000194530 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
STRADB-201ENST00000194530 KRTAP6-1Q3LI64 71 aa6.09□□□□□ -1.43
STRADB-201ENST00000194530 MT1AP04731 61 aa6.09□□□□□ -1.44
STRADB-201ENST00000194530 LCE1AQ5T7P2 110 aa6.08□□□□□ -1.44
STRADB-201ENST00000194530 KRTAP5-9P26371 169 aa6.07□□□□□ -1.44
STRADB-201ENST00000194530 KRTAP4-9Q9BYQ8 210 aa6□□□□□ -1.45
STRADB-201ENST00000194530 KRTAP5-5Q701N2 237 aaPredicted RBP5.96□□□□□ -1.45
STRADB-201ENST00000194530 MDN1Q9NU22 5596 aa5.93□□□□□ -1.46
STRADB-201ENST00000194530 SPRR2EP22531 72 aa5.92□□□□□ -1.46
STRADB-201ENST00000194530 SPRR2BP35325 72 aa5.92□□□□□ -1.46
STRADB-201ENST00000194530 SPRR2AP35326 72 aa5.92□□□□□ -1.46
STRADB-201ENST00000194530 SYNE2Q8WXH0 6885 aaKnown RBP5.89□□□□□ -1.47
STRADB-201ENST00000194530 LCE3DQ9BYE3 92 aa5.87□□□□□ -1.47
STRADB-201ENST00000194530 SYNE1Q8NF91 8797 aaKnown RBP5.82□□□□□ -1.48
STRADB-201ENST00000194530 LCE3EQ5T5B0 92 aa5.8□□□□□ -1.48
STRADB-201ENST00000194530 KRTAP9-6A0A140TA67 174 aa5.79□□□□□ -1.48
STRADB-201ENST00000194530 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
STRADB-201ENST00000194530 SPRR2DP22532 72 aa5.68□□□□□ -1.5
STRADB-201ENST00000194530 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.6□□□□□ -1.51
STRADB-201ENST00000194530 KRTAP6-3Q3LI67 103 aa5.56□□□□□ -1.52
STRADB-201ENST00000194530 KRTAP9-7A8MTY7 169 aa5.53□□□□□ -1.52
STRADB-201ENST00000194530 PRM1P04553 51 aa5.49□□□□□ -1.53
STRADB-201ENST00000194530 MT3P25713 68 aa5.48□□□□□ -1.53
STRADB-201ENST00000194530 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
STRADB-201ENST00000194530 KRTAP5-4Q6L8H1 288 aa5.27□□□□□ -1.57
STRADB-201ENST00000194530 NEBP20929 6669 aa5.15□□□□□ -1.58
STRADB-201ENST00000194530 KRTAP4-6Q9BYQ5 205 aa5.02□□□□□ -1.61
STRADB-201ENST00000194530 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
STRADB-201ENST00000194530 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
STRADB-201ENST00000194530 MT4P47944 62 aa4.96□□□□□ -1.62
STRADB-201ENST00000194530 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
STRADB-201ENST00000194530 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
STRADB-201ENST00000194530 KRTAP2-2Q9BYT5 123 aa4.84□□□□□ -1.64
STRADB-201ENST00000194530 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
STRADB-201ENST00000194530 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
STRADB-201ENST00000194530 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
STRADB-201ENST00000194530 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
STRADB-201ENST00000194530 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
STRADB-201ENST00000194530 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
STRADB-201ENST00000194530 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
STRADB-201ENST00000194530 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
STRADB-201ENST00000194530 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
STRADB-201ENST00000194530 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
STRADB-201ENST00000194530 LCE1CQ5T751 118 aa4.24□□□□□ -1.73
STRADB-201ENST00000194530 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
STRADB-201ENST00000194530 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
STRADB-201ENST00000194530 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
STRADB-201ENST00000194530 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
STRADB-201ENST00000194530 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
STRADB-201ENST00000194530 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
STRADB-201ENST00000194530 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
STRADB-201ENST00000194530 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
STRADB-201ENST00000194530 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
STRADB-201ENST00000194530 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
STRADB-201ENST00000194530 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
STRADB-201ENST00000194530 KRTAP21-1Q3LI58 79 aa3.47□□□□□ -1.85
STRADB-201ENST00000194530 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
STRADB-201ENST00000194530 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
STRADB-201ENST00000194530 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
STRADB-201ENST00000194530 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
STRADB-201ENST00000194530 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
STRADB-201ENST00000194530 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 167.1 ms