RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
TMEM38A-201ENST00000187762 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
TMEM38A-201ENST00000187762 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
TMEM38A-201ENST00000187762 KRTAP9-2Q9BYQ4 174 aa4.81□□□□□ -1.64
TMEM38A-201ENST00000187762 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
TMEM38A-201ENST00000187762 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
TMEM38A-201ENST00000187762 MUC12Q9UKN1 5478 aa4.76□□□□□ -1.65
TMEM38A-201ENST00000187762 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
TMEM38A-201ENST00000187762 MT1GP13640 62 aa4.67□□□□□ -1.66
TMEM38A-201ENST00000187762 MT1MQ8N339 61 aa4.64□□□□□ -1.67
TMEM38A-201ENST00000187762 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
TMEM38A-201ENST00000187762 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
TMEM38A-201ENST00000187762 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
TMEM38A-201ENST00000187762 SPRR2FQ96RM1 72 aa4.5□□□□□ -1.69
TMEM38A-201ENST00000187762 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.7
TMEM38A-201ENST00000187762 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
TMEM38A-201ENST00000187762 PRM1P04553 51 aa4.42□□□□□ -1.7
TMEM38A-201ENST00000187762 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
TMEM38A-201ENST00000187762 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
TMEM38A-201ENST00000187762 KRTAP4-6Q9BYQ5 205 aa4.39□□□□□ -1.71
TMEM38A-201ENST00000187762 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
TMEM38A-201ENST00000187762 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
TMEM38A-201ENST00000187762 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
TMEM38A-201ENST00000187762 MT1AP04731 61 aa4.33□□□□□ -1.72
TMEM38A-201ENST00000187762 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
TMEM38A-201ENST00000187762 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
TMEM38A-201ENST00000187762 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
TMEM38A-201ENST00000187762 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
TMEM38A-201ENST00000187762 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
TMEM38A-201ENST00000187762 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
TMEM38A-201ENST00000187762 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
TMEM38A-201ENST00000187762 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
TMEM38A-201ENST00000187762 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
TMEM38A-201ENST00000187762 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
TMEM38A-201ENST00000187762 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
TMEM38A-201ENST00000187762 SPRR2EP22531 72 aa4.08□□□□□ -1.76
TMEM38A-201ENST00000187762 SPRR2BP35325 72 aa4.08□□□□□ -1.76
TMEM38A-201ENST00000187762 SPRR2AP35326 72 aa4.08□□□□□ -1.76
TMEM38A-201ENST00000187762 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
TMEM38A-201ENST00000187762 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
TMEM38A-201ENST00000187762 SPRR2DP22532 72 aa3.89□□□□□ -1.79
TMEM38A-201ENST00000187762 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
TMEM38A-201ENST00000187762 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
TMEM38A-201ENST00000187762 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
TMEM38A-201ENST00000187762 NEBP20929 6669 aa3.74□□□□□ -1.81
TMEM38A-201ENST00000187762 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
TMEM38A-201ENST00000187762 MT3P25713 68 aa3.71□□□□□ -1.82
TMEM38A-201ENST00000187762 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
TMEM38A-201ENST00000187762 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
TMEM38A-201ENST00000187762 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
TMEM38A-201ENST00000187762 MT4P47944 62 aa3.48□□□□□ -1.85
TMEM38A-201ENST00000187762 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
TMEM38A-201ENST00000187762 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
TMEM38A-201ENST00000187762 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
TMEM38A-201ENST00000187762 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
TMEM38A-201ENST00000187762 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
TMEM38A-201ENST00000187762 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
TMEM38A-201ENST00000187762 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
TMEM38A-201ENST00000187762 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
TMEM38A-201ENST00000187762 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
TMEM38A-201ENST00000187762 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
TMEM38A-201ENST00000187762 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
TMEM38A-201ENST00000187762 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
TMEM38A-201ENST00000187762 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
TMEM38A-201ENST00000187762 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
TMEM38A-201ENST00000187762 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
TMEM38A-201ENST00000187762 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
TMEM38A-201ENST00000187762 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
TMEM38A-201ENST00000187762 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.96
TMEM38A-201ENST00000187762 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
TMEM38A-201ENST00000187762 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
TMEM38A-201ENST00000187762 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
TMEM38A-201ENST00000187762 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
TMEM38A-201ENST00000187762 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
TMEM38A-201ENST00000187762 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
TMEM38A-201ENST00000187762 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
TMEM38A-201ENST00000187762 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 8.2 ms