RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
PTPN18-201ENST00000175756 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
PTPN18-201ENST00000175756 MT1EP04732 61 aa5.73□□□□□ -1.49
PTPN18-201ENST00000175756 SSPOA2VEC9 5147 aa5.72□□□□□ -1.49
PTPN18-201ENST00000175756 SPRR2FQ96RM1 72 aa5.64□□□□□ -1.51
PTPN18-201ENST00000175756 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
PTPN18-201ENST00000175756 KRTAP2-4Q9BYR9 128 aa5.62□□□□□ -1.51
PTPN18-201ENST00000175756 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
PTPN18-201ENST00000175756 KRTAP12-4P60329 112 aa5.59□□□□□ -1.52
PTPN18-201ENST00000175756 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
PTPN18-201ENST00000175756 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
PTPN18-201ENST00000175756 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
PTPN18-201ENST00000175756 MACF1Q9UPN3 7388 aaKnown RBP5.47□□□□□ -1.53
PTPN18-201ENST00000175756 KRTAP19-3Q7Z4W3 81 aa5.4□□□□□ -1.54
PTPN18-201ENST00000175756 MT1MQ8N339 61 aa5.4□□□□□ -1.55
PTPN18-201ENST00000175756 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.56
PTPN18-201ENST00000175756 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
PTPN18-201ENST00000175756 LCE2DQ5TA82 110 aaPredicted RBP5.29□□□□□ -1.56
PTPN18-201ENST00000175756 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
PTPN18-201ENST00000175756 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
PTPN18-201ENST00000175756 SPRR2EP22531 72 aa5.12□□□□□ -1.59
PTPN18-201ENST00000175756 SPRR2BP35325 72 aa5.12□□□□□ -1.59
PTPN18-201ENST00000175756 SPRR2AP35326 72 aa5.12□□□□□ -1.59
PTPN18-201ENST00000175756 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
PTPN18-201ENST00000175756 LCE3EQ5T5B0 92 aa5.01□□□□□ -1.61
PTPN18-201ENST00000175756 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
PTPN18-201ENST00000175756 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
PTPN18-201ENST00000175756 PRM1P04553 51 aa4.94□□□□□ -1.62
PTPN18-201ENST00000175756 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
PTPN18-201ENST00000175756 SPRR2DP22532 72 aa4.87□□□□□ -1.63
PTPN18-201ENST00000175756 MT1AP04731 61 aa4.82□□□□□ -1.64
PTPN18-201ENST00000175756 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
PTPN18-201ENST00000175756 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.66
PTPN18-201ENST00000175756 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
PTPN18-201ENST00000175756 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
PTPN18-201ENST00000175756 MT4P47944 62 aa4.59□□□□□ -1.67
PTPN18-201ENST00000175756 MT3P25713 68 aa4.52□□□□□ -1.69
PTPN18-201ENST00000175756 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
PTPN18-201ENST00000175756 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
PTPN18-201ENST00000175756 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
PTPN18-201ENST00000175756 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
PTPN18-201ENST00000175756 MUC19Q7Z5P9 8384 aa4.27□□□□□ -1.73
PTPN18-201ENST00000175756 NEBP20929 6669 aa4.25□□□□□ -1.73
PTPN18-201ENST00000175756 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
PTPN18-201ENST00000175756 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
PTPN18-201ENST00000175756 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
PTPN18-201ENST00000175756 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
PTPN18-201ENST00000175756 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
PTPN18-201ENST00000175756 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
PTPN18-201ENST00000175756 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
PTPN18-201ENST00000175756 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
PTPN18-201ENST00000175756 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
PTPN18-201ENST00000175756 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
PTPN18-201ENST00000175756 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
PTPN18-201ENST00000175756 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
PTPN18-201ENST00000175756 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
PTPN18-201ENST00000175756 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
PTPN18-201ENST00000175756 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
PTPN18-201ENST00000175756 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
PTPN18-201ENST00000175756 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.88
PTPN18-201ENST00000175756 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
PTPN18-201ENST00000175756 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
PTPN18-201ENST00000175756 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
PTPN18-201ENST00000175756 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
PTPN18-201ENST00000175756 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
PTPN18-201ENST00000175756 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
PTPN18-201ENST00000175756 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
PTPN18-201ENST00000175756 KRTAP5-8O75690 187 aa3.03□□□□□ -1.93
PTPN18-201ENST00000175756 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
PTPN18-201ENST00000175756 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
PTPN18-201ENST00000175756 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
PTPN18-201ENST00000175756 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
PTPN18-201ENST00000175756 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
PTPN18-201ENST00000175756 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
PTPN18-201ENST00000175756 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
PTPN18-201ENST00000175756 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
PTPN18-201ENST00000175756 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 209.7 ms