RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
CTDP1-201ENST00000075430 MT1GP13640 62 aa5.62□□□□□ -1.51
CTDP1-201ENST00000075430 MT1LQ93083 61 aa5.61□□□□□ -1.51
CTDP1-201ENST00000075430 KRTAP2-3P0C7H8 128 aa5.59□□□□□ -1.51
CTDP1-201ENST00000075430 KRTAP2-4Q9BYR9 128 aa5.59□□□□□ -1.51
CTDP1-201ENST00000075430 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
CTDP1-201ENST00000075430 MT1EP04732 61 aa5.55□□□□□ -1.52
CTDP1-201ENST00000075430 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
CTDP1-201ENST00000075430 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
CTDP1-201ENST00000075430 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.55
CTDP1-201ENST00000075430 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
CTDP1-201ENST00000075430 KRTAP19-6Q3LI70 58 aa5.37□□□□□ -1.55
CTDP1-201ENST00000075430 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
CTDP1-201ENST00000075430 LCE2DQ5TA82 110 aaPredicted RBP5.28□□□□□ -1.56
CTDP1-201ENST00000075430 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
CTDP1-201ENST00000075430 KRTAP19-3Q7Z4W3 81 aa5.23□□□□□ -1.57
CTDP1-201ENST00000075430 MT1MQ8N339 61 aa5.23□□□□□ -1.57
CTDP1-201ENST00000075430 MDN1Q9NU22 5596 aa5.1□□□□□ -1.59
CTDP1-201ENST00000075430 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
CTDP1-201ENST00000075430 KRTAP9-2Q9BYQ4 174 aa5□□□□□ -1.61
CTDP1-201ENST00000075430 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.62
CTDP1-201ENST00000075430 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
CTDP1-201ENST00000075430 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
CTDP1-201ENST00000075430 LCE3DQ9BYE3 92 aa4.9□□□□□ -1.63
CTDP1-201ENST00000075430 PRM1P04553 51 aa4.89□□□□□ -1.63
CTDP1-201ENST00000075430 SPRR2EP22531 72 aa4.87□□□□□ -1.63
CTDP1-201ENST00000075430 SPRR2BP35325 72 aa4.87□□□□□ -1.63
CTDP1-201ENST00000075430 SPRR2AP35326 72 aa4.87□□□□□ -1.63
CTDP1-201ENST00000075430 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
CTDP1-201ENST00000075430 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
CTDP1-201ENST00000075430 SPRR2DP22532 72 aa4.63□□□□□ -1.67
CTDP1-201ENST00000075430 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
CTDP1-201ENST00000075430 MT1AP04731 61 aa4.61□□□□□ -1.67
CTDP1-201ENST00000075430 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
CTDP1-201ENST00000075430 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
CTDP1-201ENST00000075430 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
CTDP1-201ENST00000075430 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
CTDP1-201ENST00000075430 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
CTDP1-201ENST00000075430 MT4P47944 62 aa4.29□□□□□ -1.72
CTDP1-201ENST00000075430 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
CTDP1-201ENST00000075430 MT3P25713 68 aa4.26□□□□□ -1.73
CTDP1-201ENST00000075430 MUC19Q7Z5P9 8384 aa4.16□□□□□ -1.74
CTDP1-201ENST00000075430 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
CTDP1-201ENST00000075430 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
CTDP1-201ENST00000075430 NEBP20929 6669 aa4.07□□□□□ -1.76
CTDP1-201ENST00000075430 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
CTDP1-201ENST00000075430 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
CTDP1-201ENST00000075430 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
CTDP1-201ENST00000075430 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
CTDP1-201ENST00000075430 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
CTDP1-201ENST00000075430 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
CTDP1-201ENST00000075430 KRTAP5-4Q6L8H1 288 aa3.77□□□□□ -1.81
CTDP1-201ENST00000075430 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
CTDP1-201ENST00000075430 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
CTDP1-201ENST00000075430 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
CTDP1-201ENST00000075430 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
CTDP1-201ENST00000075430 KRTAP5-3Q6L8H2 238 aa3.44□□□□□ -1.86
CTDP1-201ENST00000075430 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
CTDP1-201ENST00000075430 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
CTDP1-201ENST00000075430 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
CTDP1-201ENST00000075430 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
CTDP1-201ENST00000075430 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
CTDP1-201ENST00000075430 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
CTDP1-201ENST00000075430 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
CTDP1-201ENST00000075430 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
CTDP1-201ENST00000075430 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
CTDP1-201ENST00000075430 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
CTDP1-201ENST00000075430 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
CTDP1-201ENST00000075430 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
CTDP1-201ENST00000075430 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
CTDP1-201ENST00000075430 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
CTDP1-201ENST00000075430 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
CTDP1-201ENST00000075430 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
CTDP1-201ENST00000075430 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
CTDP1-201ENST00000075430 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
CTDP1-201ENST00000075430 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
CTDP1-201ENST00000075430 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms