RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
CX3CL1-201ENST00000006053 MT1EP04732 61 aa3.56□□□□□ -1.84
CX3CL1-201ENST00000006053 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
CX3CL1-201ENST00000006053 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
CX3CL1-201ENST00000006053 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
CX3CL1-201ENST00000006053 MACF1Q9UPN3 7388 aaKnown RBP3.52□□□□□ -1.85
CX3CL1-201ENST00000006053 KRTAP9-2Q9BYQ4 174 aa3.52□□□□□ -1.85
CX3CL1-201ENST00000006053 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
CX3CL1-201ENST00000006053 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
CX3CL1-201ENST00000006053 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
CX3CL1-201ENST00000006053 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
CX3CL1-201ENST00000006053 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
CX3CL1-201ENST00000006053 MT1GP13640 62 aa3.42□□□□□ -1.86
CX3CL1-201ENST00000006053 LCE2DQ5TA82 110 aaPredicted RBP3.39□□□□□ -1.87
CX3CL1-201ENST00000006053 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
CX3CL1-201ENST00000006053 MDN1Q9NU22 5596 aa3.34□□□□□ -1.88
CX3CL1-201ENST00000006053 MT1MQ8N339 61 aa3.32□□□□□ -1.88
CX3CL1-201ENST00000006053 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
CX3CL1-201ENST00000006053 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
CX3CL1-201ENST00000006053 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
CX3CL1-201ENST00000006053 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
CX3CL1-201ENST00000006053 LCE3BQ5TA77 95 aa3.21□□□□□ -1.9
CX3CL1-201ENST00000006053 KRTAP9-6A0A140TA67 174 aa3.21□□□□□ -1.9
CX3CL1-201ENST00000006053 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
CX3CL1-201ENST00000006053 SPRR2EP22531 72 aa3.18□□□□□ -1.9
CX3CL1-201ENST00000006053 SPRR2BP35325 72 aa3.18□□□□□ -1.9
CX3CL1-201ENST00000006053 SPRR2AP35326 72 aa3.18□□□□□ -1.9
CX3CL1-201ENST00000006053 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
CX3CL1-201ENST00000006053 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
CX3CL1-201ENST00000006053 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.1□□□□□ -1.91
CX3CL1-201ENST00000006053 PRM1P04553 51 aa3.08□□□□□ -1.92
CX3CL1-201ENST00000006053 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
CX3CL1-201ENST00000006053 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
CX3CL1-201ENST00000006053 KRTAP9-7A8MTY7 169 aa3.04□□□□□ -1.92
CX3CL1-201ENST00000006053 SPRR2DP22532 72 aa3.03□□□□□ -1.92
CX3CL1-201ENST00000006053 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
CX3CL1-201ENST00000006053 MT1AP04731 61 aa3.02□□□□□ -1.93
CX3CL1-201ENST00000006053 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
CX3CL1-201ENST00000006053 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
CX3CL1-201ENST00000006053 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
CX3CL1-201ENST00000006053 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
CX3CL1-201ENST00000006053 NEBP20929 6669 aa2.82□□□□□ -1.96
CX3CL1-201ENST00000006053 MT4P47944 62 aa2.81□□□□□ -1.96
CX3CL1-201ENST00000006053 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
CX3CL1-201ENST00000006053 KRTAP9-4Q9BYQ2 154 aa2.8□□□□□ -1.96
CX3CL1-201ENST00000006053 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
CX3CL1-201ENST00000006053 MT3P25713 68 aa2.69□□□□□ -1.98
CX3CL1-201ENST00000006053 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
CX3CL1-201ENST00000006053 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
CX3CL1-201ENST00000006053 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
CX3CL1-201ENST00000006053 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
CX3CL1-201ENST00000006053 LCE4AQ5TA78 99 aa2.43□□□□□ -2.02
CX3CL1-201ENST00000006053 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
CX3CL1-201ENST00000006053 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
CX3CL1-201ENST00000006053 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
CX3CL1-201ENST00000006053 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
CX3CL1-201ENST00000006053 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
CX3CL1-201ENST00000006053 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
CX3CL1-201ENST00000006053 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
CX3CL1-201ENST00000006053 KRTAP9-9Q9BYP9 154 aa2.22□□□□□ -2.05
CX3CL1-201ENST00000006053 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
CX3CL1-201ENST00000006053 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
CX3CL1-201ENST00000006053 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
CX3CL1-201ENST00000006053 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
CX3CL1-201ENST00000006053 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
CX3CL1-201ENST00000006053 KRTAP4-2Q9BYR5 136 aa2.04□□□□□ -2.08
CX3CL1-201ENST00000006053 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
CX3CL1-201ENST00000006053 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
CX3CL1-201ENST00000006053 KRTAP4-12Q9BQ66 201 aa1.97□□□□□ -2.09
CX3CL1-201ENST00000006053 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
CX3CL1-201ENST00000006053 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
CX3CL1-201ENST00000006053 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
CX3CL1-201ENST00000006053 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
CX3CL1-201ENST00000006053 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
CX3CL1-201ENST00000006053 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
CX3CL1-201ENST00000006053 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
CX3CL1-201ENST00000006053 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 69.4 ms