RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 LRP1Q07954 4544 aaKnown RBP1.58□□□□□ -2.16
CFTR-201ENST00000003084 KRTAP5-3Q6L8H2 238 aa1.57□□□□□ -2.16
CFTR-201ENST00000003084 EPPK1P58107 5090 aaKnown RBP1.56□□□□□ -2.16
CFTR-201ENST00000003084 SPRR2DP22532 72 aa1.55□□□□□ -2.16
CFTR-201ENST00000003084 MT1XP80297 61 aa1.55□□□□□ -2.16
CFTR-201ENST00000003084 MT1BP07438 61 aa1.55□□□□□ -2.16
CFTR-201ENST00000003084 LCE3EQ5T5B0 92 aa1.53□□□□□ -2.16
CFTR-201ENST00000003084 LCE1EQ5T753 118 aa1.52□□□□□ -2.17
CFTR-201ENST00000003084 HERC2O95714 4834 aa1.51□□□□□ -2.17
CFTR-201ENST00000003084 MT1GP13640 62 aa1.5□□□□□ -2.17
CFTR-201ENST00000003084 LRP2P98164 4655 aa1.49□□□□□ -2.17
CFTR-201ENST00000003084 FAT4Q6V0I7 4981 aa1.49□□□□□ -2.17
CFTR-201ENST00000003084 KRTAP12-4P60329 112 aa1.48□□□□□ -2.17
CFTR-201ENST00000003084 KRTAP19-2Q3LHN2 52 aa1.47□□□□□ -2.17
CFTR-201ENST00000003084 UBR4Q5T4S7 5183 aa1.47□□□□□ -2.17
CFTR-201ENST00000003084 KRTAP19-6Q3LI70 58 aa1.46□□□□□ -2.18
CFTR-201ENST00000003084 KIAA1109Q2LD37 5005 aa1.46□□□□□ -2.18
CFTR-201ENST00000003084 RNF213Q63HN8 5207 aa1.46□□□□□ -2.18
CFTR-201ENST00000003084 LCE1AQ5T7P2 110 aa1.45□□□□□ -2.18
CFTR-201ENST00000003084 FLGP20930 4061 aaPredicted RBP1.45□□□□□ -2.18
CFTR-201ENST00000003084 KRTAP19-3Q7Z4W3 81 aa1.44□□□□□ -2.18
CFTR-201ENST00000003084 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
CFTR-201ENST00000003084 LCE3DQ9BYE3 92 aa1.44□□□□□ -2.18
CFTR-201ENST00000003084 LCE1FQ5T754 118 aa1.43□□□□□ -2.18
CFTR-201ENST00000003084 HMCN2Q8NDA2 5059 aa1.42□□□□□ -2.18
CFTR-201ENST00000003084 MT1EP04732 61 aa1.41□□□□□ -2.18
CFTR-201ENST00000003084 MT1LQ93083 61 aa1.41□□□□□ -2.18
CFTR-201ENST00000003084 MT1MQ8N339 61 aa1.37□□□□□ -2.19
CFTR-201ENST00000003084 USH2AO75445 5202 aa1.34□□□□□ -2.19
CFTR-201ENST00000003084 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.2
CFTR-201ENST00000003084 KRTAP20-1Q3LI63 56 aa1.33□□□□□ -2.2
CFTR-201ENST00000003084 MT4P47944 62 aa1.31□□□□□ -2.2
CFTR-201ENST00000003084 KRTAP2-3P0C7H8 128 aa1.29□□□□□ -2.2
CFTR-201ENST00000003084 KRTAP2-4Q9BYR9 128 aa1.29□□□□□ -2.2
CFTR-201ENST00000003084 MT1AP04731 61 aa1.28□□□□□ -2.2
CFTR-201ENST00000003084 GPR98Q8WXG9 6306 aa1.28□□□□□ -2.2
CFTR-201ENST00000003084 KRTAP19-7Q3SYF9 63 aa1.27□□□□□ -2.21
CFTR-201ENST00000003084 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
CFTR-201ENST00000003084 KMT2DO14686 5537 aa1.25□□□□□ -2.21
CFTR-201ENST00000003084 KRTAP4-3Q9BYR4 195 aa1.24□□□□□ -2.21
CFTR-201ENST00000003084 KRTAP9-6A8MVA2 160 aa1.23□□□□□ -2.21
CFTR-201ENST00000003084 KRTAP2-1Q9BYU5 128 aa1.23□□□□□ -2.21
CFTR-201ENST00000003084 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.21□□□□□ -2.22
CFTR-201ENST00000003084 FSIP2Q5CZC0 6907 aa1.2□□□□□ -2.22
CFTR-201ENST00000003084 SSPOA2VEC9 5147 aa1.2□□□□□ -2.22
CFTR-201ENST00000003084 LCE1BQ5T7P3 118 aa1.19□□□□□ -2.22
CFTR-201ENST00000003084 KRTAP5-2Q701N4 177 aa1.19□□□□□ -2.22
CFTR-201ENST00000003084 PRM1P04553 51 aa1.17□□□□□ -2.22
CFTR-201ENST00000003084 KRTAP6-1Q3LI64 71 aa1.16□□□□□ -2.22
CFTR-201ENST00000003084 KRTAP4-4Q9BYR3 166 aa1.15□□□□□ -2.23
CFTR-201ENST00000003084 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
CFTR-201ENST00000003084 SYNE2Q8WXH0 6885 aaKnown RBP1.13□□□□□ -2.23
CFTR-201ENST00000003084 KRTAP5-9P26371 169 aa1.13□□□□□ -2.23
CFTR-201ENST00000003084 FCGBPQ9Y6R7 5405 aaPredicted RBP1.13□□□□□ -2.23
CFTR-201ENST00000003084 DSTQ03001 7570 aaKnown RBP1.13□□□□□ -2.23
CFTR-201ENST00000003084 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
CFTR-201ENST00000003084 KRTAP5-4Q6L8H1 288 aa1.1□□□□□ -2.23
CFTR-201ENST00000003084 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
CFTR-201ENST00000003084 NEBP20929 6669 aa1.09□□□□□ -2.23
CFTR-201ENST00000003084 MDN1Q9NU22 5596 aa1.08□□□□□ -2.24
CFTR-201ENST00000003084 KRTAP5-11Q6L8G4 156 aa1.07□□□□□ -2.24
CFTR-201ENST00000003084 SYNE1Q8NF91 8797 aaKnown RBP1.06□□□□□ -2.24
CFTR-201ENST00000003084 LCE1CQ5T751 118 aa1.04□□□□□ -2.24
CFTR-201ENST00000003084 KRTAP5-1Q6L8H4 278 aa1.03□□□□□ -2.24
CFTR-201ENST00000003084 KRTAP20-2Q3LI61 65 aa1.02□□□□□ -2.25
CFTR-201ENST00000003084 MACF1Q9UPN3 7388 aaKnown RBP0.97□□□□□ -2.25
CFTR-201ENST00000003084 AHNAK2Q8IVF2 5795 aa0.92□□□□□ -2.26
CFTR-201ENST00000003084 KRTAP5-5Q701N2 237 aaPredicted RBP0.92□□□□□ -2.26
CFTR-201ENST00000003084 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
CFTR-201ENST00000003084 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
CFTR-201ENST00000003084 KRTAP5-8O75690 187 aa0.78□□□□□ -2.28
CFTR-201ENST00000003084 KRTAP5-7Q6L8G8 165 aa0.76□□□□□ -2.29
CFTR-201ENST00000003084 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
CFTR-201ENST00000003084 KRTAP5-10Q6L8G5 202 aa0.7□□□□□ -2.3
CFTR-201ENST00000003084 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
CFTR-201ENST00000003084 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
CFTR-201ENST00000003084 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 92.9 ms