RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 LRP1Q07954 4544 aaKnown RBP1.58□□□□□ -2.16
CFTR-201ENST00000003084 KRTAP5-3Q6L8H2 238 aa1.57□□□□□ -2.16
CFTR-201ENST00000003084 EPPK1P58107 5090 aaKnown RBP1.56□□□□□ -2.16
CFTR-201ENST00000003084 SPRR2DP22532 72 aa1.55□□□□□ -2.16
CFTR-201ENST00000003084 MT1XP80297 61 aa1.55□□□□□ -2.16
CFTR-201ENST00000003084 MT1BP07438 61 aa1.55□□□□□ -2.16
CFTR-201ENST00000003084 LCE3EQ5T5B0 92 aa1.53□□□□□ -2.16
CFTR-201ENST00000003084 LCE1EQ5T753 118 aa1.52□□□□□ -2.17
CFTR-201ENST00000003084 HERC2O95714 4834 aa1.51□□□□□ -2.17
CFTR-201ENST00000003084 MT1GP13640 62 aa1.5□□□□□ -2.17
CFTR-201ENST00000003084 LRP2P98164 4655 aa1.49□□□□□ -2.17
CFTR-201ENST00000003084 FAT4Q6V0I7 4981 aa1.49□□□□□ -2.17
CFTR-201ENST00000003084 KRTAP12-4P60329 112 aa1.48□□□□□ -2.17
CFTR-201ENST00000003084 KRTAP19-2Q3LHN2 52 aa1.47□□□□□ -2.17
CFTR-201ENST00000003084 UBR4Q5T4S7 5183 aa1.47□□□□□ -2.17
CFTR-201ENST00000003084 KRTAP19-6Q3LI70 58 aa1.46□□□□□ -2.18
CFTR-201ENST00000003084 KIAA1109Q2LD37 5005 aa1.46□□□□□ -2.18
CFTR-201ENST00000003084 RNF213Q63HN8 5207 aa1.46□□□□□ -2.18
CFTR-201ENST00000003084 LCE1AQ5T7P2 110 aa1.45□□□□□ -2.18
CFTR-201ENST00000003084 FLGP20930 4061 aaPredicted RBP1.45□□□□□ -2.18
CFTR-201ENST00000003084 KRTAP19-3Q7Z4W3 81 aa1.44□□□□□ -2.18
CFTR-201ENST00000003084 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
CFTR-201ENST00000003084 LCE3DQ9BYE3 92 aa1.44□□□□□ -2.18
CFTR-201ENST00000003084 LCE1FQ5T754 118 aa1.43□□□□□ -2.18
CFTR-201ENST00000003084 HMCN2Q8NDA2 5059 aa1.42□□□□□ -2.18
CFTR-201ENST00000003084 MT1EP04732 61 aa1.41□□□□□ -2.18
CFTR-201ENST00000003084 MT1LQ93083 61 aa1.41□□□□□ -2.18
CFTR-201ENST00000003084 MT1MQ8N339 61 aa1.37□□□□□ -2.19
CFTR-201ENST00000003084 USH2AO75445 5202 aa1.34□□□□□ -2.19
CFTR-201ENST00000003084 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.2
CFTR-201ENST00000003084 KRTAP20-1Q3LI63 56 aa1.33□□□□□ -2.2
CFTR-201ENST00000003084 MT4P47944 62 aa1.31□□□□□ -2.2
CFTR-201ENST00000003084 KRTAP2-3P0C7H8 128 aa1.29□□□□□ -2.2
CFTR-201ENST00000003084 KRTAP2-4Q9BYR9 128 aa1.29□□□□□ -2.2
CFTR-201ENST00000003084 MT1AP04731 61 aa1.28□□□□□ -2.2
CFTR-201ENST00000003084 GPR98Q8WXG9 6306 aa1.28□□□□□ -2.2
CFTR-201ENST00000003084 KRTAP19-7Q3SYF9 63 aa1.27□□□□□ -2.21
CFTR-201ENST00000003084 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
CFTR-201ENST00000003084 KMT2DO14686 5537 aa1.25□□□□□ -2.21
CFTR-201ENST00000003084 KRTAP4-3Q9BYR4 195 aa1.24□□□□□ -2.21
CFTR-201ENST00000003084 KRTAP9-6A8MVA2 160 aa1.23□□□□□ -2.21
CFTR-201ENST00000003084 KRTAP2-1Q9BYU5 128 aa1.23□□□□□ -2.21
CFTR-201ENST00000003084 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.21□□□□□ -2.22
CFTR-201ENST00000003084 FSIP2Q5CZC0 6907 aa1.2□□□□□ -2.22
CFTR-201ENST00000003084 SSPOA2VEC9 5147 aa1.2□□□□□ -2.22
CFTR-201ENST00000003084 LCE1BQ5T7P3 118 aa1.19□□□□□ -2.22
CFTR-201ENST00000003084 KRTAP5-2Q701N4 177 aa1.19□□□□□ -2.22
CFTR-201ENST00000003084 PRM1P04553 51 aa1.17□□□□□ -2.22
CFTR-201ENST00000003084 KRTAP6-1Q3LI64 71 aa1.16□□□□□ -2.22
CFTR-201ENST00000003084 KRTAP4-4Q9BYR3 166 aa1.15□□□□□ -2.23
CFTR-201ENST00000003084 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
CFTR-201ENST00000003084 SYNE2Q8WXH0 6885 aaKnown RBP1.13□□□□□ -2.23
CFTR-201ENST00000003084 KRTAP5-9P26371 169 aa1.13□□□□□ -2.23
CFTR-201ENST00000003084 FCGBPQ9Y6R7 5405 aaPredicted RBP1.13□□□□□ -2.23
CFTR-201ENST00000003084 DSTQ03001 7570 aaKnown RBP1.13□□□□□ -2.23
CFTR-201ENST00000003084 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
CFTR-201ENST00000003084 KRTAP5-4Q6L8H1 288 aa1.1□□□□□ -2.23
CFTR-201ENST00000003084 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
CFTR-201ENST00000003084 NEBP20929 6669 aa1.09□□□□□ -2.23
CFTR-201ENST00000003084 MDN1Q9NU22 5596 aa1.08□□□□□ -2.24
CFTR-201ENST00000003084 KRTAP5-11Q6L8G4 156 aa1.07□□□□□ -2.24
CFTR-201ENST00000003084 SYNE1Q8NF91 8797 aaKnown RBP1.06□□□□□ -2.24
CFTR-201ENST00000003084 LCE1CQ5T751 118 aa1.04□□□□□ -2.24
CFTR-201ENST00000003084 KRTAP5-1Q6L8H4 278 aa1.03□□□□□ -2.24
CFTR-201ENST00000003084 KRTAP20-2Q3LI61 65 aa1.02□□□□□ -2.25
CFTR-201ENST00000003084 MACF1Q9UPN3 7388 aaKnown RBP0.97□□□□□ -2.25
CFTR-201ENST00000003084 AHNAK2Q8IVF2 5795 aa0.92□□□□□ -2.26
CFTR-201ENST00000003084 KRTAP5-5Q701N2 237 aaPredicted RBP0.92□□□□□ -2.26
CFTR-201ENST00000003084 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
CFTR-201ENST00000003084 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
CFTR-201ENST00000003084 KRTAP5-8O75690 187 aa0.78□□□□□ -2.28
CFTR-201ENST00000003084 KRTAP5-7Q6L8G8 165 aa0.76□□□□□ -2.29
CFTR-201ENST00000003084 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
CFTR-201ENST00000003084 KRTAP5-10Q6L8G5 202 aa0.7□□□□□ -2.3
CFTR-201ENST00000003084 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
CFTR-201ENST00000003084 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
CFTR-201ENST00000003084 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 80.2 ms