RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
SEMA3F-201ENST00000002829 LCE2AQ5TA79 106 aaPredicted RBP4.65□□□□□ -1.67
SEMA3F-201ENST00000002829 SSPOA2VEC9 5147 aa4.62□□□□□ -1.67
SEMA3F-201ENST00000002829 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
SEMA3F-201ENST00000002829 MT1LQ93083 61 aa4.57□□□□□ -1.68
SEMA3F-201ENST00000002829 MT1EP04732 61 aa4.55□□□□□ -1.68
SEMA3F-201ENST00000002829 KRTAP12-4P60329 112 aa4.54□□□□□ -1.68
SEMA3F-201ENST00000002829 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
SEMA3F-201ENST00000002829 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
SEMA3F-201ENST00000002829 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
SEMA3F-201ENST00000002829 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
SEMA3F-201ENST00000002829 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
SEMA3F-201ENST00000002829 MT1MQ8N339 61 aa4.32□□□□□ -1.72
SEMA3F-201ENST00000002829 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
SEMA3F-201ENST00000002829 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
SEMA3F-201ENST00000002829 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
SEMA3F-201ENST00000002829 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
SEMA3F-201ENST00000002829 SPRR2EP22531 72 aa4.23□□□□□ -1.73
SEMA3F-201ENST00000002829 SPRR2BP35325 72 aa4.23□□□□□ -1.73
SEMA3F-201ENST00000002829 SPRR2AP35326 72 aa4.23□□□□□ -1.73
SEMA3F-201ENST00000002829 MDN1Q9NU22 5596 aa4.21□□□□□ -1.73
SEMA3F-201ENST00000002829 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.76
SEMA3F-201ENST00000002829 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
SEMA3F-201ENST00000002829 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
SEMA3F-201ENST00000002829 PRM1P04553 51 aa4.05□□□□□ -1.76
SEMA3F-201ENST00000002829 KRTAP9-7A8MTY7 169 aa4.01□□□□□ -1.77
SEMA3F-201ENST00000002829 SPRR2DP22532 72 aa4.01□□□□□ -1.77
SEMA3F-201ENST00000002829 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
SEMA3F-201ENST00000002829 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
SEMA3F-201ENST00000002829 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
SEMA3F-201ENST00000002829 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.78
SEMA3F-201ENST00000002829 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
SEMA3F-201ENST00000002829 MT4P47944 62 aa3.83□□□□□ -1.8
SEMA3F-201ENST00000002829 MUC19Q7Z5P9 8384 aa3.79□□□□□ -1.8
SEMA3F-201ENST00000002829 MT1AP04731 61 aa3.79□□□□□ -1.8
SEMA3F-201ENST00000002829 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
SEMA3F-201ENST00000002829 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
SEMA3F-201ENST00000002829 MT3P25713 68 aa3.63□□□□□ -1.83
SEMA3F-201ENST00000002829 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.57□□□□□ -1.84
SEMA3F-201ENST00000002829 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
SEMA3F-201ENST00000002829 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
SEMA3F-201ENST00000002829 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
SEMA3F-201ENST00000002829 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
SEMA3F-201ENST00000002829 KRTAP6-3Q3LI67 103 aa3.46□□□□□ -1.86
SEMA3F-201ENST00000002829 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
SEMA3F-201ENST00000002829 NEBP20929 6669 aa3.4□□□□□ -1.86
SEMA3F-201ENST00000002829 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
SEMA3F-201ENST00000002829 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
SEMA3F-201ENST00000002829 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
SEMA3F-201ENST00000002829 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
SEMA3F-201ENST00000002829 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
SEMA3F-201ENST00000002829 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
SEMA3F-201ENST00000002829 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
SEMA3F-201ENST00000002829 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.91
SEMA3F-201ENST00000002829 LCE4AQ5TA78 99 aa3□□□□□ -1.93
SEMA3F-201ENST00000002829 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
SEMA3F-201ENST00000002829 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
SEMA3F-201ENST00000002829 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
SEMA3F-201ENST00000002829 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
SEMA3F-201ENST00000002829 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
SEMA3F-201ENST00000002829 KRTAP5-3Q6L8H2 238 aa2.85□□□□□ -1.95
SEMA3F-201ENST00000002829 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
SEMA3F-201ENST00000002829 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
SEMA3F-201ENST00000002829 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
SEMA3F-201ENST00000002829 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
SEMA3F-201ENST00000002829 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
SEMA3F-201ENST00000002829 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
SEMA3F-201ENST00000002829 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
SEMA3F-201ENST00000002829 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
SEMA3F-201ENST00000002829 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
SEMA3F-201ENST00000002829 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
SEMA3F-201ENST00000002829 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
SEMA3F-201ENST00000002829 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
SEMA3F-201ENST00000002829 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
SEMA3F-201ENST00000002829 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
SEMA3F-201ENST00000002829 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
SEMA3F-201ENST00000002829 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 114.8 ms