RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Olfr364-ps1A0A140T8Q2 307 aa7.01□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Scgb1b2O35176 93 aa7.01□□□□□ -1.29
Col28a1-201ENSMUST00000115537 P01843 105 aa7.01□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm1553Q66VB7 94 aa7.01□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Arhgef17Q80U35 2057 aa7.01□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm28539A0A087WSL9 92 aa7.01□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Defb18Q30KP5 85 aa7.01□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Crip3Q6Q6R3 243 aa7.01□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ube2d2bQ6ZWY6 147 aa7.01□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Fbxl15Q91W61 300 aa7.01□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Tmem167aQ9CR64 72 aa7.01□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Plekhb2Q9QZC7 221 aa7.01□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Igkv5-37A0A140T8N4 115 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gpr82Q8BZR0 328 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Wipf1Q8K1I7 493 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Odf3Q920N1 254 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gtsf1lQ9CWD0 151 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Runx1Q03347 451 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm10192Q3V0S1 108 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ifitm10Q8BR26 201 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Spink10Q8CAC8 162 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Tac4Q99N14 128 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Prrc2aQ7TSC1 2158 aaKnown RBP7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ncoa6Q9JL19 2067 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm6525A0A0A6YW33 106 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ighv5-12-4A0A0A6YWG4 117 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Spint3Q3UW09 88 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 P01725 110 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ly6c1P0CW02 131 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Oosp2Q4FZG8 168 aa7□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ighv7-3A0A075B5R2 120 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 P01801 115 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Tmem52Q9D702 196 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 IcosQ9WVS0 200 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Usp24B1AY13 2617 aaKnown RBP6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Trav9-1A0A075B601 112 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 P01794 123 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Spata46Q4FZF2 204 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Fancd2osQ9D4K4 178 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Avpi1Q9D7H4 142 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ighv14-1A0A075B5R4 117 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Map6d1Q14BB9 191 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Plac1Q9JI83 173 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Dusp14Q9JLY7 198 aa6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 BptfA2A654 3036 aaKnown RBP6.99□□□□□ -1.29
Col28a1-201ENSMUST00000115537 AgrnA2ASQ1 1950 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Trav3-4A0A075B654 114 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Trav7-1A0A0G2JEV5 112 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Pla2g2cP48076 150 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Cdx4Q07424 282 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm12888Q3UW77 119 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Znf146Q8BQN6 292 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ovol2Q8CIV7 274 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Rasl11bQ922H7 247 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ighv2-6A0A075B6A7 116 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm15128A2ADW8 449 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm15093A2BI72 449 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Luzp4B1AV09 449 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm15127B1AVZ5 449 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm15107B1B0X0 449 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm15097E9QA14 449 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm9970F6ZED4 185 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 P01726 129 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Fgf6P21658 208 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ccl21aP84444 133 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ccl21bP86792 133 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ccl21cP86793 133 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm15085Q62012 449 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Cysltr1Q99JA4 352 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Mrpl33Q9CQP0 65 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Defa20Q45VN2 95 aa6.98□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Tanc2A2A690 1994 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ighv5-8A0A075B676 92 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 P01802 115 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 P06334 169 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ighv3-6P18531 116 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 4930596D02RikQ3V0H9 216 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Fhl4Q8CDC8 279 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Fam110aQ8R184 296 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Trdv1A0A075B657 112 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Trav14-2A0A075B694 121 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Igkv14-130A0A0G2JF45 117 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Gm21060J3KMU4 56 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ins2P01326 110 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Lynx1P0DP60 116 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Defa26Q3L180 93 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Rbfox3Q8BIF2 374 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Klk7Q91VE3 249 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 DysfQ9ESD7 2090 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 BC048562Q80ZQ7 204 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 ApomQ9Z1R3 190 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Akap13E9Q394 2776 aa6.97□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ighv1-81A0A075B5Y4 117 aa6.96□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Tcrg-C3L7N479 172 aa6.96□□□□□ -1.29
Col28a1-201ENSMUST00000115537 P03985 172 aa6.96□□□□□ -1.29
Col28a1-201ENSMUST00000115537 AmelxP63277 210 aa6.96□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Cfc1P97766 202 aa6.96□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Rnf114Q9ET26 229 aa6.96□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Ighv1-31A0A0A6YWK5 117 aa6.96□□□□□ -1.29
Col28a1-201ENSMUST00000115537 Erdr1J3QMM0 206 aa6.96□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms