RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 1700025B11RikA0A087WNZ6 93 aa13.47□□□□□ -0.25
Ubr3-202ENSMUST00000112251 C730034F03RikQ8BGL5 111 aa13.47□□□□□ -0.25
Ubr3-202ENSMUST00000112251 Q8VE95 218 aa13.47□□□□□ -0.25
Ubr3-202ENSMUST00000112251 Ndufa12Q7TMF3 145 aaKnown RBP13.47□□□□□ -0.25
Ubr3-202ENSMUST00000112251 C1qtnf5Q8K479 243 aa13.47□□□□□ -0.25
Ubr3-202ENSMUST00000112251 Tmem263Q9DAM7 115 aa13.47□□□□□ -0.25
Ubr3-202ENSMUST00000112251 Gm10428J3QNV7 132 aa13.47□□□□□ -0.25
Ubr3-202ENSMUST00000112251 Edn2P22389 175 aa13.46□□□□□ -0.25
Ubr3-202ENSMUST00000112251 Itgbl1Q8VDV0 494 aa13.46□□□□□ -0.25
Ubr3-202ENSMUST00000112251 Ndufc2Q9CQ54 120 aa13.46□□□□□ -0.25
Ubr3-202ENSMUST00000112251 Rai1Q61818 1889 aa13.46□□□□□ -0.25
Ubr3-202ENSMUST00000112251 Prss57Q14B24 284 aa13.46□□□□□ -0.25
Ubr3-202ENSMUST00000112251 P01648 108 aa13.46□□□□□ -0.25
Ubr3-202ENSMUST00000112251 CrygdP04342 174 aa13.46□□□□□ -0.25
Ubr3-202ENSMUST00000112251 Gm10799F7C7U2 104 aa13.46□□□□□ -0.26
Ubr3-202ENSMUST00000112251 BC048562Q80ZQ7 204 aa13.46□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Tnfrsf23Q9ER63 176 aa13.46□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Ighv1-31A0A0A6YWK5 117 aa13.45□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Rpl18aP62717 176 aaKnown RBP13.45□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Gm11110Q3U4K9 109 aa13.45□□□□□ -0.26
Ubr3-202ENSMUST00000112251 PtprfA2A8L5 1898 aa13.45□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Pfn1P62962 140 aa13.45□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Ube2aQ9Z255 152 aa13.45□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Vpreb3D3Z6J4 130 aa13.45□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Polr3kQ9CQZ7 108 aa13.45□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Col6a4A2AX52 2309 aa13.45□□□□□ -0.26
Ubr3-202ENSMUST00000112251 P01679 107 aa13.44□□□□□ -0.26
Ubr3-202ENSMUST00000112251 ElaneQ3UP87 265 aa13.44□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Wipf2Q6PEV3 440 aa13.44□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Spred3Q6P6N5 408 aa13.44□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Klhdc3Q8VEM9 382 aa13.44□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Synj2bpQ9D6K5 145 aa13.44□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Ighv1-39A0A075B5V5 117 aa13.44□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Znf22Q9ERU3 237 aa13.44□□□□□ -0.26
Ubr3-202ENSMUST00000112251 E030025P04RikA2A6V5 185 aa13.43□□□□□ -0.26
Ubr3-202ENSMUST00000112251 GgnQ80WJ1 673 aa13.43□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Ang3P97802 145 aa13.43□□□□□ -0.26
Ubr3-202ENSMUST00000112251 P01787 123 aa13.43□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Q9D8L0 127 aa13.43□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Ighv1-69A0A0G2JFS5 117 aa13.43□□□□□ -0.26
Ubr3-202ENSMUST00000112251 PemtQ61907 199 aa13.43□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Ang2Q64438 145 aa13.42□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Igkv2-137A0A0B4J1H6 120 aa13.42□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Vpreb2P13373 142 aa13.42□□□□□ -0.26
Ubr3-202ENSMUST00000112251 ElnP54320 860 aa13.42□□□□□ -0.26
Ubr3-202ENSMUST00000112251 CrygsO35486 178 aa13.42□□□□□ -0.26
Ubr3-202ENSMUST00000112251 P18533 117 aa13.42□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Ros1Q78DX7 2340 aa13.42□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Igkv1-88A0A140T8N1 120 aa13.42□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Smim20D3Z7Q2 69 aa13.42□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Defb47Q30KN1 79 aa13.42□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Lypd8Q9D7S0 255 aa13.42□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Trdv4Q5R1A3 115 aa13.41□□□□□ -0.26
Ubr3-202ENSMUST00000112251 9330161L09RikQ9D253 136 aa13.41□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Gm17472A0A075B683 117 aa13.41□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Sdhaf1Q3U276 118 aa13.41□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Naa38Q9D2U5 125 aa13.41□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Lims2Q91XD2 341 aa13.41□□□□□ -0.26
Ubr3-202ENSMUST00000112251 P01788 123 aa13.41□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Rnf126Q91YL2 313 aa13.41□□□□□ -0.26
Ubr3-202ENSMUST00000112251 P01629 112 aa13.41□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Ube2e1P52482 193 aa13.4□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Folr2Q05685 251 aa13.4□□□□□ -0.26
Ubr3-202ENSMUST00000112251 BC035044E0CXF8 138 aa13.4□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Slc25a48Q8BW66 306 aa13.4□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Tmem190Q9D2E9 166 aa13.4□□□□□ -0.26
Ubr3-202ENSMUST00000112251 Ptprz1B9EKR1 2312 aa13.4□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Zmat4Q8BZ94 229 aa13.39□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Nop10Q9CQS2 64 aa13.39□□□□□ -0.27
Ubr3-202ENSMUST00000112251 P01786 117 aa13.39□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Alms1Q8K4E0 3251 aa13.39□□□□□ -0.27
Ubr3-202ENSMUST00000112251 ColqO35348 457 aa13.39□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Fblim1Q71FD7 375 aa13.39□□□□□ -0.27
Ubr3-202ENSMUST00000112251 4930442H23RikQ9D5G7 103 aa13.39□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Msrb3Q8BU85 253 aa13.39□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Slc25a47Q6IS41 310 aa13.38□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Wdr83osQ6ZWX0 106 aa13.38□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Tcrg-V5A0A0G2JGV5 113 aa13.38□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Gm12830F6XVH0 157 aa13.38□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Foxf2O54743 446 aa13.38□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Atp6v0e1Q9CQD8 81 aa13.38□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Zfp646Q6NV66 1788 aa13.38□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Ighv3-1A0A075B5S6 116 aa13.37□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Wbp1P97764 304 aa13.37□□□□□ -0.27
Ubr3-202ENSMUST00000112251 B9d2Q3UK10 175 aa13.37□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Svs5P30933 122 aa13.37□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Igh-VJ558P01758 117 aa13.37□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Igkv10-95A0A0G2JFY3 115 aa13.37□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Wfdc10Q3V2J9 124 aa13.37□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Spaca3Q9D9X8 221 aa13.37□□□□□ -0.27
Ubr3-202ENSMUST00000112251 6430628N08RikA0A0U1RQ45 177 aa13.36□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Gm4744D3Z3S5 154 aa13.36□□□□□ -0.27
Ubr3-202ENSMUST00000112251 PpbpQ9EQI5 113 aa13.36□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Ly75Q60767 1723 aa13.36□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Igkv19-93A0A0G2JFZ3 115 aa13.36□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Lypd1Q8BLC3 141 aa13.36□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Rpp25lQ99JH1 163 aa13.36□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Hrct1Q9D6B9 109 aa13.36□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Efna4O08542 206 aa13.36□□□□□ -0.27
Ubr3-202ENSMUST00000112251 Reg3gO09049 174 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 81.3 ms