RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Gm7489Q3UT34 171 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Olfr322Q5NCC8 327 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Olfr317Q5NCD6 327 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Nbl1Q61477 178 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 MturnQ8CGA4 131 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gpx7Q99LJ6 186 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Znhit3Q9CQK1 151 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Spock3Q8BKV0 436 aa9.91□□□□□ -0.82
Nup88-203ENSMUST00000108531 Wfdc15bQ9JHY4 80 aa9.91□□□□□ -0.82
Nup88-203ENSMUST00000108531 Dusp14Q9JLY7 198 aa9.91□□□□□ -0.82
Nup88-203ENSMUST00000108531 Cxcl14Q9WUQ5 99 aa9.91□□□□□ -0.82
Nup88-203ENSMUST00000108531 ApomQ9Z1R3 190 aa9.91□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gm10036E9PYL9 178 aaKnown RBP9.91□□□□□ -0.82
Nup88-203ENSMUST00000108531 P06330 118 aa9.91□□□□□ -0.82
Nup88-203ENSMUST00000108531 Smim15Q3UTD9 74 aa9.91□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gm12888Q3UW77 119 aa9.91□□□□□ -0.82
Nup88-203ENSMUST00000108531 Ang2Q64438 145 aa9.91□□□□□ -0.82
Nup88-203ENSMUST00000108531 Tm4sf20Q9CQY8 226 aa9.91□□□□□ -0.82
Nup88-203ENSMUST00000108531 Ighv3-4A0A0A6YXF1 117 aa9.9□□□□□ -0.82
Nup88-203ENSMUST00000108531 Esp3J3QN49 87 aa9.9□□□□□ -0.82
Nup88-203ENSMUST00000108531 Psmb11Q8BG41 302 aa9.9□□□□□ -0.82
Nup88-203ENSMUST00000108531 Hif1anQ8BLR9 349 aa9.9□□□□□ -0.82
Nup88-203ENSMUST00000108531 Spcs1Q9D958 161 aa9.9□□□□□ -0.82
Nup88-203ENSMUST00000108531 Erg28Q9ERY9 140 aa9.9□□□□□ -0.82
Nup88-203ENSMUST00000108531 Socs3O35718 225 aa9.9□□□□□ -0.83
Nup88-203ENSMUST00000108531 P06334 169 aa9.9□□□□□ -0.83
Nup88-203ENSMUST00000108531 Fgf6P21658 208 aa9.9□□□□□ -0.83
Nup88-203ENSMUST00000108531 Htr1dQ61224 374 aa9.9□□□□□ -0.83
Nup88-203ENSMUST00000108531 Piezo1E2JF22 2547 aa9.89□□□□□ -0.83
Nup88-203ENSMUST00000108531 Ighv1-74A0A0G2JGK2 117 aa9.89□□□□□ -0.83
Nup88-203ENSMUST00000108531 Defa13P50711 93 aa9.89□□□□□ -0.83
Nup88-203ENSMUST00000108531 PerpQ9JK95 193 aa9.89□□□□□ -0.83
Nup88-203ENSMUST00000108531 Snai3Q9QY31 287 aa9.89□□□□□ -0.83
Nup88-203ENSMUST00000108531 Igkv4-71A0A0G2JEH0 117 aa9.89□□□□□ -0.83
Nup88-203ENSMUST00000108531 Obox1Q9D350 204 aa9.89□□□□□ -0.83
Nup88-203ENSMUST00000108531 Prrc2cQ3TLH4 2846 aaKnown RBP9.88□□□□□ -0.83
Nup88-203ENSMUST00000108531 Bsph2Q0Q236 131 aa9.88□□□□□ -0.83
Nup88-203ENSMUST00000108531 Tmem11Q8BK08 190 aa9.88□□□□□ -0.83
Nup88-203ENSMUST00000108531 Gtf2h5Q8K2X8 71 aa9.88□□□□□ -0.83
Nup88-203ENSMUST00000108531 Tmem97Q8VD00 176 aa9.88□□□□□ -0.83
Nup88-203ENSMUST00000108531 Ociad2Q9D8W7 154 aa9.88□□□□□ -0.83
Nup88-203ENSMUST00000108531 Smg1Q8BKX6 3658 aaKnown RBP9.88□□□□□ -0.83
Nup88-203ENSMUST00000108531 Cep250Q60952 2414 aa9.88□□□□□ -0.83
Nup88-203ENSMUST00000108531 Gm26602M0QWA4 95 aa9.88□□□□□ -0.83
Nup88-203ENSMUST00000108531 Bak1O08734 209 aa9.88□□□□□ -0.83
Nup88-203ENSMUST00000108531 Abca4O35600 2310 aa9.87□□□□□ -0.83
Nup88-203ENSMUST00000108531 Cdx4Q07424 282 aa9.87□□□□□ -0.83
Nup88-203ENSMUST00000108531 Ufc1Q9CR09 167 aa9.87□□□□□ -0.83
Nup88-203ENSMUST00000108531 Tmem219Q9D123 240 aa9.87□□□□□ -0.83
Nup88-203ENSMUST00000108531 Mettl26Q9DCS2 204 aa9.87□□□□□ -0.83
Nup88-203ENSMUST00000108531 S100a8P27005 89 aa9.87□□□□□ -0.83
Nup88-203ENSMUST00000108531 Zfp248Q640N4 576 aa9.87□□□□□ -0.83
Nup88-203ENSMUST00000108531 Chac1Q8R3J5 223 aa9.87□□□□□ -0.83
Nup88-203ENSMUST00000108531 Mcrip2Q9CQB2 160 aaKnown RBP9.87□□□□□ -0.83
Nup88-203ENSMUST00000108531 Ndufa11Q9D8B4 141 aa9.87□□□□□ -0.83
Nup88-203ENSMUST00000108531 Hbb-bsA8DUK4 147 aa9.86□□□□□ -0.83
Nup88-203ENSMUST00000108531 Fam240bJ3QMB3 78 aa9.86□□□□□ -0.83
Nup88-203ENSMUST00000108531 Gm9242J3QNY1 357 aa9.86□□□□□ -0.83
Nup88-203ENSMUST00000108531 P01794 123 aa9.86□□□□□ -0.83
Nup88-203ENSMUST00000108531 Hbb-b1P02088 147 aa9.86□□□□□ -0.83
Nup88-203ENSMUST00000108531 SbpP15501 199 aa9.86□□□□□ -0.83
Nup88-203ENSMUST00000108531 Gm17334Q8C6U3 126 aa9.86□□□□□ -0.83
Nup88-203ENSMUST00000108531 Nit2Q9JHW2 276 aa9.86□□□□□ -0.83
Nup88-203ENSMUST00000108531 Ighv5-8A0A075B676 92 aa9.85□□□□□ -0.83
Nup88-203ENSMUST00000108531 H2al2bA9Z055 111 aa9.85□□□□□ -0.83
Nup88-203ENSMUST00000108531 Ndufa1O35683 70 aa9.85□□□□□ -0.83
Nup88-203ENSMUST00000108531 Edn3P48299 214 aa9.85□□□□□ -0.83
Nup88-203ENSMUST00000108531 Khdc1cQ4KL78 166 aa9.85□□□□□ -0.83
Nup88-203ENSMUST00000108531 Defb33Q30KN3 62 aa9.85□□□□□ -0.83
Nup88-203ENSMUST00000108531 Srsf1Q6PDM2 248 aaKnown RBP9.85□□□□□ -0.83
Nup88-203ENSMUST00000108531 Ubtd1Q91WB7 227 aa9.85□□□□□ -0.83
Nup88-203ENSMUST00000108531 Sec16aA2AIX1 2377 aa9.85□□□□□ -0.83
Nup88-203ENSMUST00000108531 Ighv1-62-3P01754 117 aa9.84□□□□□ -0.83
Nup88-203ENSMUST00000108531 Fhl1P97447 280 aaKnown RBP9.84□□□□□ -0.83
Nup88-203ENSMUST00000108531 Cby1Q9D1C2 127 aa9.84□□□□□ -0.83
Nup88-203ENSMUST00000108531 Defa34D3Z0J0 93 aa9.84□□□□□ -0.83
Nup88-203ENSMUST00000108531 TcraP01849 138 aa9.84□□□□□ -0.83
Nup88-203ENSMUST00000108531 Cox7cP17665 63 aa9.84□□□□□ -0.83
Nup88-203ENSMUST00000108531 Lmo4P61969 165 aa9.84□□□□□ -0.83
Nup88-203ENSMUST00000108531 Odf1Q61999 247 aa9.84□□□□□ -0.83
Nup88-203ENSMUST00000108531 Igkv4-70A0A0B4J1I5 116 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Lce6aD3YV94 81 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Mob4Q6PEB6 225 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Atp6v0bQ91V37 205 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Tmem14cQ9CQN6 114 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Gm29289A0A087WPY7 166 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Gm4064A0A087WR82 380 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Gm10352B2RWR6 380 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Umad1E0CX23 159 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Gm21693J3QK27 380 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Rbmy1a1O35698 380 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 TshbP12656 138 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Tal2Q62282 108 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Odf3Q920N1 254 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Dpm3Q9D1Q4 92 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Q9DAB9 146 aa9.83□□□□□ -0.84
Nup88-203ENSMUST00000108531 Hcfc1Q61191 2045 aaKnown RBP9.82□□□□□ -0.84
Nup88-203ENSMUST00000108531 Ighv1-9A0A0A6YW37 117 aa9.82□□□□□ -0.84
Nup88-203ENSMUST00000108531 Defa26Q3L180 93 aa9.82□□□□□ -0.84
Nup88-203ENSMUST00000108531 Ndufa4Q62425 82 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms